Results 131 to 140 of about 5,063 (236)

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG [PDF]

, 2011
Background: Metagenomics is the study of microbial organisms using sequencing applied directly to environmental samples. Technological advances in next-generation sequencing methods are fueling a rapid increase in the number and scope of metagenome ...
Richter, DC, Richter, Daniel C., Urich, Tim, Jack A Gilbert, Gilbert, Jack A., Rupek, P, Gilbert, J.A, Folker Meyer, Urich, T, Mitra, S, Suparna Mitra, Paul Rupek, Tim Urich, Huson, DH, Huson, D.H, Huson, Daniel H., Andreas Wilke, Richter, D.C, Gilbert, JA, Meyer, F, Wilke, A, Daniel C Richter, Daniel H Huson, Wilke, Andreas, Mitra, Suparna, Rupek, Paul, Meyer, Folker   +26 more
core   +1 more source

Additional file 2 of Integrated meta-omics reveals new ruminal microbial features associated with feed efficiency in dairy cattle

, 2022
Additional file 1: Supplementary Table S1. Comparison of physiological parameters between low- and high-efficiency cows. Supplementary Table S2. Summary of metagenomic and metatranscriptomic sequencing data. Supplementary Table S3.
Yifan Zhong (6115982), Yun-Yi Xie (10127851), Ming-Yuan Xue (4638460), Hui-Zeng Sun (1677703), Jian-Xin Liu (11063345), Xiao-Jiao Ma (12098158)   +5 more
core   +1 more source

Warming effects on marine microzooplankton and mixoplankton: Physiological responses, community reorganization, and implications for a warming ocean

Limnology and Oceanography, Volume 71, Issue 8, August 2026.
Abstract Microzooplankton and mixoplankton are key regulators of marine food webs, yet their responses to ocean warming and thermal extremes remain incompletely integrated across physiological, community, and ecosystem scales. This synthesis examines how temperature shapes the physiology, trophic strategies, and community dynamics of these protistan ...
Albert Calbet
wiley   +1 more source

Table_1_Viroid-like RNA-dependent RNA polymerase-encoding ambiviruses are abundant in complex fungi.XLSX

, 2023
Ambiviruses are hybrid infectious elements encoding the hallmark gene of RNA viruses, the RNA-dependent RNA polymerase, and self-cleaving RNA ribozymes found in many viroids.
Li Chuin Chong (6288848), Chris Lauber (206300)   +1 more
core   +1 more source

Three Decades of Soil N2O Research—Insights and Gaps

Global Change Biology, Volume 32, Issue 8, August 2026.
Progress in N2O Research and Key Breakthroughs and Transitions from 1990 to 2025 across three domains: (A) process understanding, (B) microbial ecology, and (C) modelling of soil N2O emissions. ABSTRACT Nitrous oxide (N2O) is a potent greenhouse gas (GHG) whose atmospheric concentration continues to rise, largely driven by nitrogen (N) inputs to ...
Klaus Butterbach‐Bahl, Laurent Philippot, João Serra, Whendee L. Silver, Stephen Ogle, Diego Abalos   +5 more
wiley   +1 more source

The encoded and expressed biosynthetic potential of Greenland Ice Sheet microbes

Frontiers in Microbiology
Supraglacial habitats of the Greenland Ice Sheet (GrIS) harbor active microbial communities. Microbes produce a plethora of natural products, which hold great promise in biotechnology.
Ate H. Jaarsma, Katie Sipes, Athanasios Zervas, Helen K. Feord, Francisco Campuzano Jiménez, Mariane S. Thøgersen, Liane G. Benning, Liane G. Benning, Martyn Tranter, Alexandre M. Anesio   +9 more
doaj   +1 more source

Accession data for analysed Xestospongia testudinaria metatranscriptomes

, 2016
Assigning functions to uncultivated environmental microorganisms continues to be a challenging endeavour. Here, we present a new microscopy protocol for fluorescence in situ hybridisation-correlative light and electron microscopy (FISH-CLEM) that enabled,
Moitinho-Silva, Lucas, Timothy Ravasi (7884944), Ryu, Tae Woo, Markert, Sebastian M, Hentschel, Ute, Sebastian M Markert (8016911), Jahn, Martin T, Lucas Moitinho-Silva (3404429), Martin T Jahn (8016908), Ute Hentschel (8013980), Ryu, Taewoo, Christian Stigloher (8016914), Ravasi, Timothy, Stigloher, Christian, Taewoo Ryu (75481)   +14 more
core   +1 more source

Table_3_Viroid-like RNA-dependent RNA polymerase-encoding ambiviruses are abundant in complex fungi.XLSX

, 2023
Ambiviruses are hybrid infectious elements encoding the hallmark gene of RNA viruses, the RNA-dependent RNA polymerase, and self-cleaving RNA ribozymes found in many viroids.
Chris Lauber, Li Chuin Chong, Li Chuin Chong (6288848), Chris Lauber (206300)   +3 more
core   +1 more source

Table_2_Viroid-like RNA-dependent RNA polymerase-encoding ambiviruses are abundant in complex fungi.XLSX

, 2023
Ambiviruses are hybrid infectious elements encoding the hallmark gene of RNA viruses, the RNA-dependent RNA polymerase, and self-cleaving RNA ribozymes found in many viroids.
Li Chuin Chong (6288848), Chris Lauber (206300)   +1 more
core   +1 more source

Low abundance of Archaeorhizomycetes among fungi in soil metatranscriptomes

Scientific Reports, 2016
The Archaeorhizomycetes are recently discovered fungi with poorly resolved ecology. Even their abundance in soil fungal communities is currently disputed.
M. Choma, J. Bárta, H. Šantrůčková, T. Urich   +3 more
semanticscholar   +1 more source