Results 91 to 100 of about 18,529 (279)
Microbial Biodiversity and Molecular Approach [PDF]
, 2010 Biodiversity is given by the variety of species on Earth resulting from billions of years of evolution. Molecular-phylogenetic studies have revealed that the main diversity of life is microbial and it is distributed among three domains: Achaea, Bacteria,
KISAND Veljo +2 more
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Frontiers in Microbiology, 2020 Coral reefs are highly diverse marine ecosystems increasingly threatened on a global scale. The foundation species of reef ecosystems are stony corals that depend on their symbiotic microalgae and bacteria for aspects of their metabolism, immunity, and ...
Anny Cárdenas +7 more
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Evolution of the Quorum Sensing Regulon in Cooperating Populations of Pseudomonas aeruginosa
mBio, 2022 In the opportunistic pathogenic bacterium Pseudomonas aeruginosa acyl-homoserine lactone quorum sensing (QS) can activate expression of dozens to hundreds of genes depending on the strain under investigation.
Nicole E. Smalley +5 more
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Illuminating the Plant Rhabdovirus Landscape through Metatranscriptomics Data
bioRxiv, 2021 Rhabdoviruses infect a large number of plant species and cause significant crop diseases. They have a negative-sense, single-stranded unsegmented or bisegmented RNA genome.
N. Bejerman, R. Dietzgen, H. Debat
semanticscholar +1 more source
Advances and Challenges in Metatranscriptomic Analysis
Frontiers in Genetics, 2019 Sequencing-based analyses of microbiomes have traditionally focused on addressing the question of community membership and profiling taxonomic abundance through amplicon sequencing of 16 rRNA genes. More recently, shotgun metagenomics, which involves the random sequencing of all genomic content of a microbiome, has dominated this arena due to ...
Migun Shakya +2 more
openaire +3 more sources
eLife, 2020 Mosquitoes are major infectious disease-carrying vectors. Assessment of current and future risks associated with the mosquito population requires knowledge of the full repertoire of pathogens they carry, including novel viruses, as well as their blood ...
Joshua Batson +7 more
semanticscholar +1 more source
International Journal of Molecular Sciences, 2022 Metatranscriptomics has emerged as a very useful technology for the study of microbiomes from RNA-seq reads. This method provides additional information compared to the sequencing of ribosomal genes because the gene expression can also be analysed.
M. Rey-Campos +4 more
semanticscholar +1 more source
Targeted metatranscriptomics of compost derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity [PDF]
, 2017 Background: Using globally abundant crop residues as a carbon source for energy generation and renewable chemicals production stands out as a promising solution to reduce current dependency on fossil fuels.
A Bacic +98 more
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Metatranscriptomic census of active protists in soils [PDF]
The ISME Journal, 2015 Abstract The high numbers and diversity of protists in soil systems have long been presumed, but their true diversity and community composition have remained largely concealed. Traditional cultivation-based methods miss a majority of taxa, whereas molecular barcoding approaches employing PCR introduce significant biases in reported ...
Geisen, S. +6 more
openaire +4 more sources
Dinucleotide distance histograms for fast detection of rRNA in metatranscriptomic sequences [PDF]
, 2013 With the advent of metatranscriptomics it has now become possible to study the dynamics of microbial communities. The analysis of environmental RNA-Seq data implies several challenges for the development of efficient tools in bioinformatics.
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