Results 51 to 60 of about 18,529 (279)

The Human Microbiome and Recurrent Abdominal Pain in Children [PDF]

, 2010
This project explores the nature of the human intestinal microbiome in healthy children and children with recurrent abdominal pain. The overall goal is to obtain a robust knowledge base of the intestinal microbiome in children without evidence of pain or
Debasmita Mandal, Delphine Saulnier, James Versalovic, James Versalovic, Joseph Petrosino, Kevin Riehle, Maria Diaz, Richard Gibbs, Robert Shulman, Sabeen Raza, Susan Lynch, Toni-Ann Mistretta, Xiang Qin   +12 more
core   +3 more sources

Microbial Community and Metabolic Activity in Thiocyanate Degrading Low Temperature Microbial Fuel Cells

Frontiers in Microbiology, 2018
Thiocyanate is a toxic compound produced by the mining and metallurgy industries that needs to be remediated prior to its release into the environment.
Gaofeng Ni, Sebastian Canizales, Elias Broman, Domenico Simone, Viraja R. Palwai, Daniel Lundin, Margarita Lopez-Fernandez, Tom Sleutels, Mark Dopson   +8 more
doaj   +1 more source

Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce

mSystems, 2021
The health, growth, and fitness of boreal forest trees are impacted and improved by their associated microbiomes. Microbial gene expression and functional activity can be assayed with RNA sequencing (RNA-Seq) data from host samples.
Andreas N. Schneider, John Sundh, Görel Sundström, Kerstin Richau, Nicolas Delhomme, Manfred Grabherr, Vaughan Hurry, Nathaniel R. Street   +7 more
doaj   +1 more source

Use of Metatranscriptomics in Microbiome Research [PDF]

Bioinformatics and Biology Insights, 2016
The human intestinal microbiome is a microbial ecosystem that expresses as many as 100 times more genes than the human host, thereby constituting an important component of the human holobiome, which contributes to multiple health and disease processes.
Stavros Bashiardes, Gili Zilberman-Schapira, Eran Elinav   +2 more
openaire   +4 more sources

A de-novo-assembly-based Data Analysis Pipeline for Plant Obligate Parasite Metatranscriptomic Studies

Frontiers in Plant Science, 2016
Current and emerging plant diseases caused by obligate parasitic microbes such as rusts, downy mildews, and powdery mildews threaten worldwide crop production and food safety.
Li Guo, Kelly S Allen, Kelly S Allen, Greg A Deiulio, Greg A Deiulio, Yong Zhang, Yong Zhang, Angela M Madeiras, Robert L Wick, Li-Jun Ma   +9 more
doaj   +1 more source

Statistical approaches for differential expression analysis in metatranscriptomics

Bioinform., 2021
Motivation Metatranscriptomics (MTX) has become an increasingly practical way to profile the functional activity of microbial communities in situ. However, MTX remains underutilized due to experimental and computational limitations.
Yancong Zhang, Kelsey N. Thompson, C. Huttenhower, E. Franzosa   +3 more
semanticscholar   +1 more source

Comparison of Niskin vs. in situ approaches for analysis of gene expression in deep Mediterranean Sea water samples [PDF]

, 2014
Author Posting. © The Author(s), 2014. This is the author's version of the work. It is posted here by permission of Elsevier for personal use, not for redistribution. The definitive version was published in Deep Sea Research Part II: Topical Studies in
Edgcomb, Virginia P., Engstrom, Ivory B., Honjo, Susumu, Pachiadaki, Maria G., Taylor, Craig D., Yakimov, Michail M.   +5 more
core   +1 more source

Using omics and integrated multi-omics approaches to guide probiotic selection to mitigate chytridiomycosis and other emerging infectious diseases

Frontiers in Microbiology, 2016
Emerging infectious diseases in wildlife are responsible for massive population declines. In amphibians, chytridiomycosis caused by Batrachochytrium dendrobatidis, Bd, has severely affected many amphibian populations and species around the world.
Eria Alaide Rebollar, Rachael E Antwis, Rachael E Antwis, Rachael E Antwis, Matthew H Becker, Lisa K Belden, Molly C Bletz, Robert M Brucker, Xavier A Harrison, Myra C Hughey, Jordan G Kueneman, Andrew H Loudon, Valerie eMcKenzie, Daniel eMedina, Kevin PC Minbiole, Louise A Rollins-Smith, Jennifer B Walke, Sophie eWeiss, Douglas C Woodhams, Reid N Harris   +19 more
doaj   +1 more source

Metatranscriptome of human faecal microbial communities in a cohort of adult men [PDF]

, 2018
The gut microbiome is intimately related to human health, but it is not yet known which functional activities are driven by specific microorganisms\u27 ecological configurations or transcription.
Abu-Ali, Galeb S., Branck, Tobyn, Chan, Andrew T., Drew, David A., DuLong, Casey, Huttenhower, Curtis, Ivey, Kerry L., Izard, Jacques, Lloyd-Price, Jason, Mallick, Himel, Mehta, Raaj S., Rimm, Eric   +11 more
core   +2 more sources

Metatranscriptomic Analysis of Arctic Peat Soil Microbiota [PDF]

Applied and Environmental Microbiology, 2014
ABSTRACT Recent advances in meta-omics and particularly metatranscriptomic approaches have enabled detailed studies of the structure and function of microbial communities in many ecosystems. Molecular analyses of peat soils, ecosystems important to the global carbon balance, are still challenging due to the presence of ...
Tveit, Alexander Tøsdal, Tim, Urich, Svenning, Mette Marianne   +2 more
openaire   +4 more sources