Results 61 to 70 of about 18,529 (279)
Streams of data from drops of water: 21st century molecular microbial ecology [PDF]
, 2018 Microorganisms are ubiquitous and represent a taxonomically and functionally diverse component of freshwater environments of significant ecological importance.
Clark, DR +8 more
core +2 more sources
Comparison of Metagenomics and Metatranscriptomics Tools: A Guide to Making the Right Choice
Genes, 2022 The study of microorganisms is a field of great interest due to their environmental (e.g., soil contamination) and biomedical (e.g., parasitic diseases, autism) importance.
L. Terrón-Camero +3 more
semanticscholar +1 more source
Isolation of high quality RNA from soil-grown Ilex paraguariensis roots suitable for next-generation sequencing and gene expression analyses [PDF]
, 2017 Extraction of high quality RNA is a prerequisite for downstream application in functional genomics analyses. However, the extraction and purification of pure nucleic acids from root tissues is generally difficult due to the high concentration of ...
Acevedo, Raúl Maximiliano +4 more
core +1 more source
Bacterial metatranscriptome of dentin caries [PDF]
Journal of Oral Microbiology, 2017 Dental caries results from altered microbial community activity in disease compared to health. Caries advanced into dentin was compared with coronal caries and caries-free sites. Oral bacterial samples were obtained from young children, placed in RNAlater and stored frozen. mRNA was purified and sequenced on an Illumina NextSeq 500 platform.
Anne CR Tanner +7 more
openaire +2 more sources
Frontiers in Microbiology, 2018 While most studies using RNA-stable isotope probing (SIP) to date have focused on ribosomal RNA, the detection of 13C-labeled mRNA has rarely been demonstrated.
Lauren M. Bradford +6 more
doaj +1 more source
Environmental DNA, 2023 Temperate coastal marine waters are often thermally stratified from spring through fall but can be dynamic and disrupted by tidal currents and wind‐driven upwelling. These mixing events introduce deeper, cooler water with a higher partial pressure of CO2
Ben J. G. Sutherland +8 more
doaj +1 more source
Metabolic network analysis reveals microbial community interactions in anammox granules. [PDF]
, 2017 Microbial communities mediating anaerobic ammonium oxidation (anammox) represent one of the most energy-efficient environmental biotechnologies for nitrogen removal from wastewater.
Bhattacharjee, Ananda S +6 more
core +2 more sources
Current Knowledge and Computational Techniques for Grapevine Meta-Omics Analysis
Frontiers in Plant Science, 2018 Growing grapevine (Vitis vinifera) is a key contribution to the economy of many countries. Tools provided by genomics and bioinformatics did help researchers in obtaining biological knowledge about the different cultivars.
Salvatore Alaimo +4 more
doaj +1 more source
An Alternative Method to Niskin Sampling for Molecular Analysis of the Marine Environment [PDF]
, 2017 The development of low-cost, open-source Remotely Operated Vehicle (ROV) systems has provided almost unrestricted access for researchers looking to monitor the marine environment in ever greater resolution.
1. Teague, J +4 more
core +5 more sources
Controlling taxa abundance improves metatranscriptomics differential analysis
BMC Microbiology, 2022 Abstract Background A common task in analyzing metatranscriptomics data is to identify microbial metabolic pathways with differential RNA abundances across multiple sample groups. With information from paired metagenomics data, some differential methods control for either DNA or taxa abundances
Zhicheng Ji, Li Ma
openaire +3 more sources