Results 1 to 10 of about 5,691 (138)

Uncovering the small proteome of Methanosarcina mazei using Ribo-seq and peptidomics under different nitrogen conditions [PDF]

Nature Communications
The mesophilic methanogenic archaeal model organism Methanosarcina mazei strain Gö1 is crucial for climate and environmental research due to its ability to produce methane. Here, we establish a Ribo-seq protocol for M.
Muhammad Aammar Tufail, Britta Jordan, Lydia Hadjeras, Rick Gelhausen, Liam Cassidy, Tim Habenicht, Miriam Gutt, Lisa Hellwig, Rolf Backofen, Andreas Tholey, Cynthia M. Sharma, Ruth A. Schmitz   +11 more
doaj   +3 more sources

Co-occurrence of Methanosarcina mazei and Geobacteraceae in an iron(III)-reducing enrichment culture [PDF]

Frontiers in Microbiology, 2015
Methanosaeta harundinacea and Methanosarcina barkeri, known as classic acetoclastic methanogens, are capable of directly accepting electrons from Geobacter metallireducens for the reduction of carbon dioxide to methane, having been revealed as direct ...
Shiling eZheng, Hongxia eZhang, Hongxia eZhang, Ying eLi, Ying eLi, Hua eZhang, Oumei eWang, Jun eZhang, Fanghua eLiu   +8 more
doaj   +4 more sources

Dual-RNAseq Analysis Unravels Virus-Host Interactions of MetSV and Methanosarcina mazei [PDF]

Viruses, 2022
Methanosarcina spherical virus (MetSV), infecting Methanosarcina species, encodes 22 genes, but their role in the infection process in combination with host genes has remained unknown.
Finn O. Gehlert, Till Sauerwein, Katrin Weidenbach, Urska Repnik, Daniela Hallack, Konrad U. Förstner, Ruth A. Schmitz   +6 more
doaj   +2 more sources

Small protein mediates inhibition of ammonium transport in Methanosarcina mazei—an ancient mechanism? [PDF]

Microbiology Spectrum, 2023
In the past decade, small open reading frames (sORFs) coding for proteins less than 70 amino acids (aa) in length have moved into the focus of science. sORFs and the corresponding small proteins have been recently identified in all three domains of life.
Tim Habenicht, Katrin Weidenbach, Adrian Velazquez-Campoy, Ruben M. Buey, Monica Balsera, Ruth A. Schmitz   +5 more
doaj   +2 more sources

Draft genome sequence data on Methanosarcina mazei OFF1024 isolated from paddy field of Pondicherry, IndiaNCBI) [PDF]

Data in Brief
This article presents the draft genome sequence of Methanosarcina mazei strain OFF1024, isolated from paddy field sediments of Pondicherry, India.
Munisamy Prathaban, Murugesan Sobanaa, Ragothaman Prathiviraj, S. Hari Krishna Kumar, George Seghal Kiran, Joseph Selvin, Laurent Dufossé   +6 more
doaj   +2 more sources

Cometabolism of ferrihydrite reduction and methyl-dismutating methanogenesis by Methanosarcina mazei [PDF]

Applied and Environmental Microbiology
Recent discoveries have shown that some Methanosarcina species can reduce Fe(III), reshaping our understanding of Methanosarcina ecophysiology. However, the specific minerals reduced, the products formed, and the underlying metabolic mechanisms remain ...
Chaojie Guo, Yahai Lu
doaj   +2 more sources

H₂-dependent modulation of tetrahydromethanopterin S-methyltransferase (Mtr complex) activity by the small protein MtrR in Methanosarcina mazei. [PDF]

FEBS J
Small protein MtrR is a regulator of the Mtr methyltransferase complex in Methanosarcina mazei. It binds specifically to the MtrA subunit and modulates Mtr activity in response to hydrogen (H2) availability. Deleting mtrR impairs growth in the presence but not absence of H2, indicating its role in directing methyl transfer toward an energy‐conserving ...
Habenicht T, Hastedt B, Cassidy L, Kießling C, Tholey A, Schuller JM, Schmitz RA.   +6 more
europepmc   +2 more sources

Mining Proteomic Data to Expose Protein Modifications in Methanosarcina mazei strain Gö1 [PDF]

Frontiers in Microbiology, 2015
Proteomic tools identify constituents of complex mixtures, often delivering long lists of identified proteins. The high-throughput methods excel at matching tandem mass spectrometry data to spectra predicted from sequence databases.
Deborah eLeon, A. Jimmy Ytterberg, Pinmanee eBoontheung, Unmi eKim, Joseph eLoo, Rob eGunsalus, Rachel R. Ogorzalek Loo   +6 more
doaj   +2 more sources

2-oxoglutarate triggers assembly of active dodecameric Methanosarcina mazei glutamine synthetase [PDF]

eLife
Glutamine synthetases (GS) are central enzymes essential for the nitrogen metabolism across all domains of life. Consequently, they have been extensively studied for more than half a century.
Eva Herdering, Tristan Reif-Trauttmansdorff, Anuj Kumar, Tim Habenicht, Georg Hochberg, Stefan Bohn, Jan Schuller, Ruth Anne Schmitz   +7 more
doaj   +2 more sources

Isolation and characterization of new strains KOR-3, -4, -5, and -6 from an anaerobic digester using pig slurry [PDF]

Asian-Australasian Journal of Animal Sciences, 2017
Objective An experiment was conducted to isolate and identify new methanogens in Korea from an anaerobic digester that uses pig slurry. Methods An anaerobic digestate sample was collected from an anaerobic digester using pig slurry.
Urantulkhuur Battumur, Youngman Yoon, Gui Sek Bae, Chang-Hyun Kim   +3 more
doaj   +2 more sources