Results 11 to 20 of about 594,887 (306)

MicroClAn: Microarray Clustering Analysis [PDF]

Journal of Parallel and Distributed Computing, 2013
Evaluating clustering results is a fundamental task in microarray data analysis, due to the lack of enough biological knowledge to know in advance the true partition of genes. Many quality indexes for gene clustering evaluation have been proposed. A critical issue in this domain is to compare and aggregate quality indexes to select the best clustering ...
Alessandro Fiori, Au, Bandyopadhyay, Baralis, Bonifati, Braun, Brock, Bruno, Chen, Chen, Cooke, Cuzzocrea, Datta, Davies, DeConde, Dembélé, Dwork, Giulia Bruno, Golub, Halkidi, Handl, Jiang, Jiang, Jiang, Karypis, Kerr, Krishna, Larsen, Liu, Madeira, Maulik, Pihur, Pihur, Pihur, Raczynski, Rand, Richards, Robinson, Rousseeuw, Schena, Sharan, Sokal, Tan, Thompson, Tobita, Topcuoglu, Tseng, Yeung, Zhang   +48 more
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Analysis of cDNA microarray images [PDF]

Briefings in Bioinformatics, 2001
Microarrays are part of a new class of biotechnologies that allow the monitoring of expression levels for thousands of genes simultaneously. Image analysis is an important aspect of microarray experiments, one that can have a potentially large impact on subsequent analyses, such as clustering or the identification of differentially expressed genes ...
Yee Hwa Yang, Michael J. Buckley, Terence P. Speed   +2 more
openaire   +2 more sources

Microarray Analysis in Glioblastomas [PDF]

, 2015
Microarray analysis in glioblastomas is done using either cell lines or patient samples as starting material. A survey of the current literature points to transcript-based microarrays and immunohistochemistry (IHC)-based tissue microarrays as being the preferred methods of choice in cancers of neurological origin. Microarray analysis may be carried out
Bhawe, Kaumudi M, Aghi, Manish K
openaire   +4 more sources

Non-negligible Occurrence of Errors in Gender Description in Public Data Sets [PDF]

Genomics & Informatics, 2016
Due to advances in omics technologies, numerous genome-wide studies on human samples have been published, and most of the omics data with the associated clinical information are available in public repositories, such as Gene Expression Omnibus and ...
Jong Hwan Kim, Jong-Luyl Park, Seon-Young Kim   +2 more
doaj   +1 more source

Genomic Microarray Analysis [PDF]

, 2015
Microarrays utilize classical hybridization techniques to measure the levels of expression of genomic sequences. Advances in microarray fabrication using robotic technology and bioinformatics, now means entire genomes can be interrogated with a high degree of sensitivity, specificity and throughput.
Hamlet, S, Petcu, E, Ivanovski, S
openaire   +3 more sources

Y-Chromosome Genetic Analysis of Modern Polish Population

Frontiers in Genetics, 2020
The study presents a full analysis of the Y-chromosome variability of the modern male Polish population. It is the first study of the Polish population to be conducted with such a large set of data (2,705 individuals), which includes genetic information ...
Łukasz Grochowalski, Justyna Jarczak, Justyna Jarczak, Maria Urbanowicz, Marcin Słomka, Marcin Słomka, Maria Szargut, Maria Szargut, Paulina Borówka, Marta Sobalska-Kwapis, Marta Sobalska-Kwapis, Błażej Marciniak, Błażej Marciniak, Andrzej Ossowski, Andrzej Ossowski, Wiesław Lorkiewicz, Dominik Strapagiel, Dominik Strapagiel   +17 more
doaj   +1 more source

Screening and Identification of Muscle-Specific Candidate Genes via Mouse Microarray Data Analysis

Frontiers in Veterinary Science, 2021
Muscle tissue is involved with every stage of life activities and has roles in biological processes. For example, the blood circulation system needs the heart muscle to transport blood to all parts, and the movement cannot be separated from the ...
Sayed Haidar Abbas Raza, Chengcheng Liang, Wang Guohua, Sameer D. Pant, Zuhair M. Mohammedsaleh, Abdullah F. Shater, Mashael Alhumaidi Alotaibi, Rajwali Khan, Nicola Schreurs, Gong Cheng, Chugang Mei, Linsen Zan, Linsen Zan   +12 more
doaj   +1 more source

Defining quantification methods and optimizing protocols for microarray hybridization of circulating microRNAs

Scientific Reports, 2017
MicroRNAs (miRNAs) have emerged as promising biomarkers of disease. Their potential use in clinical practice requires standardized protocols with very low miRNA concentrations, particularly in plasma samples.
Anna Garcia-Elias, Leonor Alloza, Eulàlia Puigdecanet, Lara Nonell, Marta Tajes, Joao Curado, Cristina Enjuanes, Oscar Díaz, Jordi Bruguera, Julio Martí-Almor, Josep Comín-Colet, Begoña Benito   +11 more
doaj   +1 more source

Molecular Pathogenesis and Immune Evasion of Vesicular Stomatitis New Jersey Virus Inferred from Genes Expression Changes in Infected Porcine Macrophages

Pathogens, 2021
The molecular mechanisms associated with the pathogenesis of vesicular stomatitis virus (VSV) in livestock remain poorly understood. Several studies have highlighted the relevant role of macrophages in controlling the systemic dissemination of VSV during
Lauro Velazquez-Salinas, Jessica A. Canter, James J. Zhu, Luis L. Rodriguez   +3 more
doaj   +1 more source

Analysing Microarray Data using the Multi-functional Immune Ontologiser

Journal of Integrative Bioinformatics, 2006
Gene expression microarrays are a prominent experimental tool in functional genomics allowing researchers to gain a deeper understanding of biological processes.
Khalid Sabah, Khan Mohsin, Wang Ping, Liu Xiaohui, Li Suling   +4 more
doaj   +1 more source