Results 21 to 30 of about 3,397,292 (246)

Higher-order interactions shape microbial interactions as microbial community complexity increases [PDF]

Scientific Reports, 2022
ABSTRACT Non-pairwise interactions, or higher-order interactions (HOIs), in microbial communities have been claimed to explain the emergent features in microbiomes. Yet, the re-organization of microbial interactions between pairwise cultures and larger communities remains largely unexplored from a molecular ...
Manon A. Morin, Anneliese J. Morrison, Michael J. Harms, Rachel J. Dutton   +3 more
openaire   +5 more sources

Microbial community development in a dynamic gut model is reproducible, colon region specific, and selective for Bacteroidetes and Clostridium cluster IX [PDF]

, 2010
Dynamic, multicompartment in vitro gastrointestinal simulators are often used to monitor gut microbial dynamics and activity. These reactors need to harbor a microbial community that is stable upon inoculation, colon region specific, and relevant to in ...
Marzorati, M., Sam Possemiers, Sahar El Aidy, Kleerebezem, M., Verstraete, Willy, Smidt, H., Marzorati, Massimo, Philippe Gérard, Rabot, S., Charlotte Grootaert, Verstraete, W., Aidy, S.F., El, Erwin Zoetendal, Hauke Smidt, Possemiers, Sam, Zoetendal, Erwin, Kleerebezem, Michiel, van der Wiele, T., Sylvie Rabot, Grootaert, C., Michiel Kleerebezem, Possemiers, S., Massimo Marzorati, Derrien, Muriel, Pieter Van den Abbeele, Tom Van de Wiele, Derrien, M.M.N., Rabot, Sylvie, Grootaert, Charlotte, van den Abbeele, P., Bruneau, A., Wiele, T., van der, Willy Verstraete, Zoetendal, E.G., El Aidy, Sahar, Gerard, Philippe, Abbeele, P., van den, Muriel Derrien, Smidt, Hauke, Van de Wiele, Tom, Gérard, P., Van den Abbeele, Pieter, Bruneau, Aurelia, El Aidy, S.F., Aurélia Bruneau   +44 more
core   +1 more source

Pathogenic functions of host microbiota

Microbiome, 2018
Background It is becoming evident that certain features of human microbiota, encoded by distinct autochthonous taxa, promote disease. As a result, borders between the so-called opportunistic pathogens, pathobionts, and commensals are increasingly blurred,
Silke Rath, Tatjana Rud, André Karch, Dietmar Helmut Pieper, Marius Vital   +4 more
doaj   +1 more source

Microbial control of root-pathogenic fungi and oomycetes [PDF]

, 2015
The rhizosphere is a complex and dynamic environment in which microbes introduced to control root pathogens must establish and maintain populations of sufficient size and activity to antagonize pathogens directly or by manipulating the host plant’s own ...
Bakker, P.A.H.M., Sub Plant-Microbe Interactions, Dep Biologie, Lugtenberg, Ben, Plant Microbe Interactions, Thomashow, L.S.   +5 more
core   +1 more source

Novel tools for genomic modification and heterologous gene expression in the phylum Planctomycetota

Applied Microbiology and Biotechnology
Members of the phylum Planctomycetota possess a plethora of intriguing and hitherto underexplored features including an enlarged periplasmic space, asymmetric cell division (“budding”), and a mostly undiscovered small molecule portfolio. Due to the large
Tom Haufschild, Jonathan Hammer, Nico Rabold, Veronika Plut, Christian Jogler, Nicolai Kallscheuer   +5 more
doaj   +1 more source

Gut microbiome and aging—A dynamic interplay of microbes, metabolites, and the immune system

FEBS Letters, EarlyView.
Age‐dependent shifts in microbial communities engender shifts in microbial metabolite profiles. These in turn drive shifts in barrier surface permeability of the gut and brain and induce immune activation. When paired with preexisting age‐related chronic inflammation this increases the risk of neuroinflammation and neurodegenerative diseases.
Aaron Mehl, Eran Blacher
wiley   +1 more source

Microbial interactions and biocontrol in the rhizosphere [PDF]

Journal of Experimental Botany, 2001
The loss of organic material from the roots provides the energy for the development of active microbial populations in the rhizosphere around the root. Generally, saproptrophs or biotrophs such as mycorrhizal fungi grow in the rhizosphere in response to this carbon loss, but plant pathogens may also develop and infect a susceptible host, resulting in ...
openaire   +2 more sources

Three strains isolated from Northern Germany constitute the novel genera Njordella and Rania in the family Pirellulaceae

Scientific Reports
This study reports the characterization of three novel species belonging to the two newly established genera Njordella gen. nov. and Rania gen. nov. in the family Pirellulaceae within the phylum Planctomycetota.
Myriel Staack, Tom Haufschild, Jonathan Hammer, Nicolai Kallscheuer, Gaurav Kumar, Christian Jogler   +5 more
doaj   +1 more source

The human gut microbiome across the life course

FEBS Letters, EarlyView.
Despite significant individual variation and continuous change throughout life, the human gut microbiome follows some life stage‐specific trends. This article provides a brief overview of how gut microbiome composition shifts across different phases of life. Created in BioRender. Özkurt, E. (2026) https://BioRender.com/8q4nrnc.
Alise J. Ponsero, Basak Bahcivanci, Antonietta Hayhoe, Animesh Acharjee, Ezgi Özkurt   +4 more
wiley   +1 more source

A novel strain isolated from methane seeps in the Kattegat belongs to the planctomycetal species Novipirellula methanifontis sp. nov.

Scientific Reports
Here, we present the bacterial isolate SH528T, a planctomycetal strain from the collection of Heinz Schlesner (Kiel University), a pioneer in the research on budding bacteria. Genomic and physiological features of the novel strain are characterized along
Myriel Staack, Tom Haufschild, Jonathan Hammer, Nicolai Kallscheuer, Gaurav Kumar, Christian Jogler   +5 more
doaj   +1 more source