Results 21 to 30 of about 102,184 (119)
Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq
BMC Genomics, 2022 Background Over 4 million SARS-CoV-2 genomes have been sequenced globally in the past 2 years. This has been crucial in elucidating transmission chains within communities, the development of new diagnostic methods, vaccines, and antivirals.
Derek Tshiabuila +12 more
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Shifting Feeding Habits During Settlement Among Small Yellow Croakers (Larimichthys polyactis)
Frontiers in Marine Science, 2022 The small yellow croaker, Larimichthys polyactis, is a keystone species in the Yellow Sea and the East China Sea, with significant impacts on the regional ecosystem, but has experienced decades of population decline as a result of environmental changes ...
Yuange Chen +4 more
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The complete mitogenome of Caridina indistincta ‘sp. A’ (Decapoda: Atyidae)
Mitochondrial DNA. Part B. Resources, 2018 A complete mitochondrial genome sequence was determined for a member of the Caridina indistincta species complex known as C. indistincta ‘sp. A’. The 15,461 bp sequence (GenBank: MH189850) was obtained via genome skimming, and contains 13 protein coding ...
Daniel J. Schmidt
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Frontiers in Microbiology, 2023 Culture-independent metagenomic sequencing of enriched agricultural water could expedite the detection and virulotyping of Shiga toxin-producing Escherichia coli (STEC).
Meghan Maguire +7 more
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Mitochondrial DNA. Part B. Resources, 2017 The complete mitochondrial genomes of four fish species of the commercially important family Latidae were sequenced using the Illumina MiSeq, thereby significantly increasing the mitogenomic resources for the family.
Han Ming Gan +6 more
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Scientific Reports, 2023 Illumina MiSeq is the current standard for characterizing microbial communities in soil. The newer alternative, Oxford Nanopore Technologies MinION sequencer, is quickly gaining popularity because of the low initial cost and longer sequence reads ...
Bo Maxwell Stevens +3 more
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Complete mitogenomes of five ecologically diverse Australian freshwater fishes
Mitochondrial DNA. Part B. Resources, 2019 Complete mitochondrial genome sequences were determined for five species of Australian freshwater fishes, representing a diverse range of ecologies and life histories. Mitogenomes were sequenced and annotated for Craterocephalus stramineus (Atherinidae);
Daniel J. Schmidt, Carmel McDougall
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PLoS ONE, 2020 We sequenced 25 isolates of phenotypically multidrug-resistant Salmonella Indiana (n = 11), Typhimurium (n = 8), and Enteritidis (n = 6) using both MinION long-read [SQK-LSK109 and flow cell (R9.4.1)] and MiSeq short-read (Nextera XT and MiSeq Reagent ...
Zhao Chen +6 more
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PhytoFrontiers, 2023 During a project investigating pea viruses in the United Kingdom and developing a workflow for high-throughput sequencing in crop surveillance, pea necrotic yellow dwarf virus (PNYDV) was identified at one site, along with pea enation mosaic virus-1, pea
A. R. Fowkes +14 more
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A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife. [PDF]
PLoS Neglected Tropical Diseases, 2015 BACKGROUND:Rodents are major reservoirs of pathogens responsible for numerous zoonotic diseases in humans and livestock. Assessing their microbial diversity at both the individual and population level is crucial for monitoring endemic infections and ...
Maria Razzauti +8 more
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