Results 31 to 40 of about 120,736 (335)

Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp [PDF]

open access: yesFrontiers in Microbiology, 2017
Abstract Microbial community profiling by barcoded 16S rRNA gene amplicon sequencing currently has many applications in microbial ecology. The low costs of the parallel sequencing of multiplexed samples, combined with the relative ease of data processing and interpretation (compared to shotgun metagenomes) have made ...
Dong, Xiaoli   +6 more
openaire   +3 more sources

Characterization of complete mitochondrial genome of Pogonophryne albipinna (Perciformes: Artedidraconidae)

open access: yesMitochondrial DNA. Part B. Resources, 2020
The complete mitochondrial genome of Pogonophryne albipinna was determined by the MiSeq platform, which was the first report in the family Artedidraconidae.
Nazia Tabassum   +6 more
doaj   +1 more source

Development and Validation of a Next-Generation Sequencing Assay for BRCA1 and BRCA2 Variants for the Clinical Laboratory. [PDF]

open access: yesPLoS ONE, 2015
The objective of this study was to design and validate a next-generation sequencing assay (NGS) to detect BRCA1 and BRCA2 mutations. We developed an assay using random shearing of genomic DNA followed by RNA bait tile hybridization and NGS sequencing on ...
Charles M Strom   +11 more
doaj   +1 more source

Design and use of a new primer pair for the characterization of the cyanobacteria Synechococcus and Prochlorococcus communities targeting petB gene through metabarcoding approaches

open access: yesMethodsX, 2023
During the last years, the application of next-generation sequencing (NGS) technologies to search for specific genetic markers has become a crucial method for the characterization of microbial communities.
Alexandra Coello-Camba   +2 more
doaj   +1 more source

Whole-Genome Sequencing of SARS-CoV-2: Assessment of the Ion Torrent AmpliSeq Panel and Comparison with the Illumina MiSeq ARTIC Protocol

open access: yesJournal of Clinical Microbiology, 2021
Fast and effective methods are needed for sequencing of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome to track genetic mutations and to identify new and emerging variants during the ongoing pandemic.
Jonathan Plitnick   +5 more
semanticscholar   +1 more source

jzohren/crispr-miseq: v1.0.0

open access: yes, 2021
<p>This is the first release. It is associated with Douglas et al.
Jasmin Zohren
core   +1 more source

Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)

open access: yesMitochondrial DNA. Part B. Resources, 2020
The entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology.
Nazia Tabassum   +4 more
doaj   +1 more source

Assessment of Metagenomic Sequencing and qPCR for Detection of Influenza D Virus in Bovine Respiratory Tract Samples

open access: yesViruses, 2020
High throughput sequencing is currently revolutionizing the genomics field and providing new approaches to the detection and characterization of microorganisms.
Maodong Zhang   +5 more
doaj   +1 more source

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

open access: yesThe ISME Journal, 2012
DNA sequencing continues to decrease in cost with the Illumina HiSeq2000 generating up to 600 Gb of paired-end 100 base reads in a ten-day run. Here we present a protocol for community amplicon sequencing on the HiSeq2000 and MiSeq Illumina platforms ...
J. Caporaso   +15 more
semanticscholar   +1 more source

Demultiplexed Illumina MiSeq ITS Sequences

open access: yes, 2022
Merged ITS sequences from paired-end Illumina MiSeq run ...
Clifton Bueno de Mesquita (10573952)
core   +1 more source

Home - About - Disclaimer - Privacy