Results 31 to 40 of about 102,184 (119)

Comparative analysis of targeted next-generation sequencing for Plasmodium falciparum drug resistance markers

Scientific Reports, 2022
Well-defined molecular resistance markers are available for a range of antimalarial drugs, and molecular surveillance is increasingly important for monitoring antimalarial drug resistance.
Chanon Kunasol, Arjen M. Dondorp, Elizabeth M. Batty, Vorthunju Nakhonsri, Puritat Sinjanakhom, Nicholas P. J. Day, Mallika Imwong   +6 more
doaj   +1 more source

Evaluación de la Diversidad Bacteriana de Compostas y Vermicompostas Alimentadas con Desechos Animales. Análisis de Datos Basado en la Secuenciación de Alto Rendimiento de Illumina

Terra Latinoamericana
Los desechos orgánicos animales se aplican comúnmente al suelo para mejorar la fertilidad, pero antes de la aplicación, a menudo se compostan o se vermicompostan para producir un producto más estabilizado, rico en nutrientes y con una amplia diversidad ...
Rocío del Pilar Serrano-Ramírez, Mario Hernández-Guzmán, Víctor Manuel Ruíz-Valdiviezo, Luc Dendooven, Adalberto Zenteno-Rojas, Joaquín Adolfo Montes-Molina   +5 more
doaj   +1 more source

A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq [PDF]

PeerJ, 2016
Background The bacterial 16S rRNA gene has historically been used in defining bacterial taxonomy and phylogeny. However, there are currently no high-throughput methods to sequence full-length 16S rRNA genes present in a sample with precision.
Catherine M. Burke, Aaron E. Darling
doaj   +2 more sources

Low-level point heteroplasmy detection in human mitogenomes amplified with different polymerases and sequenced on MiSeq FGx platform

Archives of Forensic Medicine and Criminology, 2023
Introduction: Massively parallel sequencing of mitogenomes usually requires prior amplification.
Katarzyna Skonieczna, Marzanna Ciesielka, Grzegorz Teresiński, Tomasz Grzybowski   +3 more
doaj   +1 more source

Towards clinical molecular diagnosis of inherited cardiac conditions: a comparison of bench-top genome DNA sequencers.

PLoS ONE, 2013
BackgroundMolecular genetic testing is recommended for diagnosis of inherited cardiac disease, to guide prognosis and treatment, but access is often limited by cost and availability.
Xinzhong Li, Andrew J Buckton, Samuel L Wilkinson, Shibu John, Roddy Walsh, Tomas Novotny, Iveta Valaskova, Manu Gupta, Laurence Game, Paul J R Barton, Stuart A Cook, James S Ware   +11 more
doaj   +1 more source

Analysis Comparison for Rapid Identification of Pathogenic Virus from Infected Tissue Samples

Diagnostics, 2022
When examining infectious samples, rapid identification of the pathogenic agent is required for diagnosis and treatment or for investigating the cause of death.
Junji Hosokawa-Muto, Yukiko Sassa-O’Brien, Yoshihito Fujinami, Hiroaki Nakahara   +3 more
doaj   +1 more source

Mitochondrial genome sequencing with short overlapping amplicons on MiSeq FGx system

Forensic Sciences Research, 2021
With the development and maturation of massively parallel sequencing (MPS) technology, the mitochondrial genome (mitogenome) sequencing is increasingly applied in the forensic field.
Yang Xin, Rulin Jia, Suhua Zhang, Fei Guo   +3 more
doaj   +1 more source

CDSnake: Snakemake pipeline for retrieval of annotated OTUs from paired-end reads using CD-HIT utilities

BMC Bioinformatics, 2020
Background Illumina paired-end reads are often used for 16S analysis in metagenomic studies. Since DNA fragment size is usually smaller than the sum of lengths of paired reads, reads can be merged for downstream analysis.
Yulia Kondratenko, Anton Korobeynikov, Alla Lapidus   +2 more
doaj   +1 more source

Illumina iSeq 100 and MiSeq exhibit similar performance in freshwater fish environmental DNA metabarcoding

Scientific Reports, 2021
Environmental DNA (eDNA) analysis is a method of detecting DNA from environmental samples and is used as a biomonitoring tool. In recent studies, Illumina MiSeq has been the most extensively used tool for eDNA metabarcoding.
Ryohei Nakao, Ryutei Inui, Yoshihisa Akamatsu, Masuji Goto, Hideyuki Doi, Shunsuke Matsuoka   +5 more
doaj   +1 more source

Targeted fetal cell‐free DNA screening for aneuploidies in 4,594 pregnancies: Single center study

Molecular Genetics & Genomic Medicine, 2019
Background Next‐generation sequencing (NGS) and discovery of fetal cell‐free DNA (cfDNA) in the maternal circulation render possible prenatal screening for trisomy 21 (Down syndrome), trisomy 18, trisomy 13, and sex chromosome aneuploidies.
Altug Koc, Ozge Ozer Kaya, Berk Ozyilmaz, Yasar B. Kutbay, Ozgur Kirbiyik, Taha R. Ozdemir, Kadri M. Erdogan, Merve Saka Guvenc, Deniz C. Oztekin, Mehmet Ozeren, Halil G. Pala, Atalay Ekin, Cenk Gezer, Alkim G. Sahingoz Yildirim, Bahar Konuralp Atakul, Secil Kurtulmus, Ugur Turhan, Cuneyt E. Taner   +17 more
doaj   +1 more source