Results 31 to 40 of about 145,034 (286)
Evaluating the capacity of human gut microorganisms to colonize the zebrafish larvae (Danio rerio) [PDF]
, 2018 Indexación: Scopus.In this study we evaluated if zebrafish larvae can be colonized by human gut microorganisms. We tested two strategies: (1) through transplantation of a human fecal microbiota and (2) by successively transplanting aerotolerant anaerobic
Angelica Reyes-Jara +14 more
core +2 more sources
Mitochondrial DNA. Part B. Resources, 2017 The complete mitochondrial genomes of four fish species of the commercially important family Latidae were sequenced using the Illumina MiSeq, thereby significantly increasing the mitogenomic resources for the family.
Han Ming Gan +6 more
doaj +1 more source
Scientific Reports, 2023 Illumina MiSeq is the current standard for characterizing microbial communities in soil. The newer alternative, Oxford Nanopore Technologies MinION sequencer, is quickly gaining popularity because of the low initial cost and longer sequence reads ...
Bo Maxwell Stevens +3 more
doaj +1 more source
Complete mitogenomes of five ecologically diverse Australian freshwater fishes
Mitochondrial DNA. Part B. Resources, 2019 Complete mitochondrial genome sequences were determined for five species of Australian freshwater fishes, representing a diverse range of ecologies and life histories. Mitogenomes were sequenced and annotated for Craterocephalus stramineus (Atherinidae);
Daniel J. Schmidt, Carmel McDougall
doaj +1 more source
PLoS ONE, 2020 We sequenced 25 isolates of phenotypically multidrug-resistant Salmonella Indiana (n = 11), Typhimurium (n = 8), and Enteritidis (n = 6) using both MinION long-read [SQK-LSK109 and flow cell (R9.4.1)] and MiSeq short-read (Nextera XT and MiSeq Reagent ...
Zhao Chen +6 more
doaj +1 more source
PhytoFrontiers, 2023 During a project investigating pea viruses in the United Kingdom and developing a workflow for high-throughput sequencing in crop surveillance, pea necrotic yellow dwarf virus (PNYDV) was identified at one site, along with pea enation mosaic virus-1, pea
A. R. Fowkes +14 more
doaj +1 more source
Reproducibility of methylated CpG typing with the Illumina MiSeq [PDF]
Forensic Science International: Genetics Supplement Series, 2017 Abstract DNA methylation patterns may be used for identification of body fluids and for age estimation of human individuals. We evaluated some of the challenges and pitfalls of studying methylated CpG sites. We compared the methylated CpG analysis of two different methods 1) massively parallel sequencing (MPS) using the Illumina MiSeq and 2) the iPLEX
Kampmann, Marie-Louise +4 more
openaire +2 more sources
Dietary Uncoupling of Gut Microbiota and Energy Harvesting from Obesity and Glucose Tolerance in Mice [PDF]
, 2017 The authors gratefully acknowledge Doctoral Training Partnership funding from the BBSRC (M.J.D.) and funding from the Scottish Government (P.J.M., A.W.R., and A.W.W.).
Dalby, Matthew J. +3 more
core +2 more sources
Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp [PDF]
Frontiers in Microbiology, 2017 AbstractMicrobial community profiling by barcoded 16S rRNA gene amplicon sequencing currently has many applications in microbial ecology. The low costs of the parallel sequencing of multiplexed samples, combined with the relative ease of data processing and interpretation (compared to shotgun metagenomes) have made this an entry-level approach. Here we
Dong, Xiaoli +6 more
openaire +3 more sources
A Comparison between Transcriptome Sequencing and 16S Metagenomics for Detection of Bacterial Pathogens in Wildlife. [PDF]
PLoS Neglected Tropical Diseases, 2015 BACKGROUND:Rodents are major reservoirs of pathogens responsible for numerous zoonotic diseases in humans and livestock. Assessing their microbial diversity at both the individual and population level is crucial for monitoring endemic infections and ...
Maria Razzauti +8 more
doaj +1 more source