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Data in Brief, 2023 Here we report the draft genome sequence of the Latilactobacillus curvatus PN39MY strain. The strain was isolated from Lithuanian traditionally (homemade) fermented cucumber. The genome consisted of 83 contigs with a total size of 1,899,018 bp, an N50 of
Eric Banan-Mwine Daliri +3 more
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Lagrangians for Biological Models [PDF]
Journal of Nonlinear Mathematical Physics, 2012 We show that a method presented in [S.L. Trubatch and A. Franco, Canonical Procedures for Population Dynamics, J. Theor. Biol. 48 (1974), 299-324] and later in [G.H. Paine, The development of Lagrangians for biological models, Bull. Math. Biol. 44 (1982) 749-760] for finding Lagrangians of classic models in biology, is actually based on finding the ...
M.C. Nucci, K.M. Tamizhmani
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Modeling adaptive biological systems [PDF]
Biosystems, 1989 During the evolution of many systems found in nature, both the system composition and the interactions between components will vary. Equating the dimension with the number of different components, a system which adds or deletes components belongs to a class of dynamical systems with a finite dimensional phase space of variable dimension. We present two
Bagley, R. J. +5 more
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KEGG mapping tools for uncovering hidden features in biological data
Protein Science, 2021 In contrast to artificial intelligence and machine learning approaches, KEGG (https://www.kegg.jp) has relied on human intelligence to develop “models” of biological systems, especially in the form of KEGG pathway maps that are manually created by ...
M. Kanehisa +2 more
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Biological applications of knowledge graph embedding models
Briefings Bioinform., 2020 Complex biological systems are traditionally modelled as graphs of interconnected biological entities. These graphs, i.e. biological knowledge graphs, are then processed using graph exploratory approaches to perform different types of analytical and ...
Sameh K. Mohamed, A. Nounu, V. Nováček
semanticscholar +1 more source
Anomalous relaxation kinetics of biological lattice-ligand binding models [PDF]
, 2002 We discuss theoretical models for the cooperative binding dynamics of ligands to substrates, such as dimeric motor proteins to microtubules or more extended macromolecules like tropomyosin to actin filaments.
Andrej Vilfan +67 more
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Impact of Dose Calculation Algorithms and Radiobiological Parameters on Prediction of Cardiopulmonary Complications in Left Breast Radiation Therapy [PDF]
Journal of Biomedical Physics and EngineeringBackground: Breast cancer requires evaluating treatment plans using dosimetric and biological parameters. Considering radiation dose distribution and tissue response, healthcare professionals can optimize treatment plans for better outcomes.
Niloofar Kargar +2 more
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Reaction-diffusion models for biological pattern formation [PDF]
, 2001 We consider the use of reaction-diffusion equations to model biological pattern formation and describe the derivation of the reaction-terms for several illustrative examples.
Crampin, E. J., Maini, P. K.
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Autocatalytic Models for the Origin of Biological Homochirality. [PDF]
Chemical Reviews, 2019 Autocatalytic models for the emergence of homochirality have been of interest for more than half a century. The sole experimental example of such an amplifying autocatalytic reaction is the Soai reaction.
D. Blackmond
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Automatic landmarking for building biological shape models [PDF]
, 2002 We present a new method for automatic landmark extraction from the contours of biological specimens. Our ultimate goal is to enable automatic identification of biological specimens in photographs and drawings held in a database.
Bayer, M.M. +5 more
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