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A molecular phylogeny of Hypnales (Bryophyta) inferred from ITS2 sequence-structure data [PDF]
BMC Research Notes, 2010 Background Hypnales comprise over 50% of all pleurocarpous mosses. They provide a young radiation complicating phylogenetic analyses. To resolve the hypnalean phylogeny, it is necessary to use a phylogenetic marker providing highly variable features to ...
Wolf Matthias, Merget Benjamin
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MBEToolbox: a Matlab toolbox for sequence data analysis in molecular biology and evolution [PDF]
BMC Bioinformatics, 2005 Background MATLAB is a high-performance language for technical computing, integrating computation, visualization, and programming in an easy-to-use environment.
Xia Xuhua +3 more
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BMC Research Notes, 2022 Objective Elizabethkingia meningoseptica is a multidrug resistance strain which primarily causes meningitis in neonates and immunocompromised patients. Being a nosocomial infection causing agent, less information is available in literature, specifically,
Neha Girdhar +2 more
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Molecular BioComputing Suite: A Word Processor Add-In for the Analysis and Manipulation of Nucleic Acid and Protein Sequence Data [PDF]
BioTechniques, 2001 In all fields of molecular biology, researchers are increasingly challenged by experiments planned and evaluated on the basis of nucleic acid and protein sequence data generally retrieved from public databases.
Patrick Y. Muller +2 more
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Biomolecules, 2021 Objective: To identify and validate circulating micro RNAs (miRNAs) that mark gene expression changes in articular cartilage early in osteoarthritis (OA) pathophysiology process.
Yolande F. M. Ramos +7 more
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Zoonotic Malaria Risk in Serra Do Mar, Atlantic Forest, Brazil
Microorganisms, 2023 Here, the main goal is to assess natural infections of Plasmodium spp. in anophelines in a forest reserve from the same region where we previously found a surprisingly high rate (5.2%) of plasmodia infections (n = 25) in Kerteszia mosquitoes (N = 480) on
Marina E. O. Rangel +7 more
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Rise and Fall of SARS-CoV-2 Lineage A.27 in Germany
Viruses, 2021 Here, we report on the increasing frequency of the SARS-CoV-2 lineage A.27 in Germany during the first months of 2021. Genomic surveillance identified 710 A.27 genomes in Germany as of 2 May 2021, with a vast majority identified in laboratories from a ...
Sébastien Calvignac-Spencer +10 more
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Molecular Acquisition, Cleaning and Evaluation in R (MACER) - A tool to assemble molecular marker datasets from BOLD and GenBank [PDF]
Biodiversity Data Journal, 2021 Molecular sequence data is an essential component for many biological fields of study. The strength of these data is in their ability to be centralised and compared across research studies.
Robert Young +3 more
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Molecular Description of a Novel Orientia Species Causing Scrub Typhus in Chile
Emerging Infectious Diseases, 2020 Scrub typhus is a potentially fatal rickettsiosis caused by Orientia species intracellular bacteria of the genus Orientia. Although considered to be restricted to the Asia Pacific region, scrub typhus has recently been discovered in southern Chile.
Katia Abarca +7 more
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TRAPR: R Package for Statistical Analysis and Visualization of RNA-Seq Data [PDF]
Genomics & Informatics, 2017 High-throughput transcriptome sequencing, also known as RNA sequencing (RNA-Seq), is a standard technology for measuring gene expression with unprecedented accuracy.
Jae Hyun Lim, Soo Youn Lee, Ju Han Kim
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