Results 11 to 20 of about 1,866,758 (264)
Computational characterization and analysis of molecular sequence data of Elizabethkingia meningoseptica. [PDF]
BMC Res Notes, 2022 Abstract Objective Elizabethkingia meningoseptica is a multidrug resistance strain which primarily causes meningitis in neonates and immunocompromised patients. Being a nosocomial infection causing agent, less information is available in literature, specifically, about its genomic makeup and associated features.
Girdhar N, Kumari N, Krishnamachari A.
europepmc +4 more sources
New molecular sequence data and species trees for North American whipsnakes. [PDF]
Data Brief, 2018 In this data article we present species trees based on coalescent species delimitation results for North American whipsnakes, as well as metadata pertaining to the article "The effect of missing data on coalescent species delimitation and a taxonomic revision of whipsnakes (Colubridae: Masticophis)" (MPE-2017-76-R1).
O'Connell KA, Smith EN.
europepmc +5 more sources
Classification of molecular sequence data using Bayesian phylogenetic mixture models [PDF]
Computational Statistics & Data Analysis, 2014 Rate variation among the sites of a molecular sequence is commonly found in applications of phylogenetic inference. Several approaches exist to account for this feature but they do not usually enable the investigator to pinpoint the sites that evolve under one or another rate of evolution in a straightforward manner.
Elisa Loza-Reyes +2 more
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Diversification of Neoaves: integration of molecular sequence data and fossils [PDF]
Biology Letters, 2006 Patterns of diversification and timing of evolution within Neoaves, which includes almost 95% of all bird species, are virtually unknown. On the other hand, molecular data consistently indicate a Cretaceous origin of many neoavian lineages and the fossil record seems to support an Early Tertiary diversification. Here, we present the first well-resolved
Per G P, Ericson +9 more
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Optimizing nucleic acid sequences for a molecular data recorder [PDF]
Proceedings of the Genetic and Evolutionary Computation Conference, 2017 We recently reported the design for a DNA nano-device that can record and store molecular signals. Here we present an evolutionary algorithm tailored to optimising nucleic acid sequences that predictively fold into our desired target structures. In our approach, a DNA device is first specified abstractly: the topology of the individual strands and ...
Jerzy Kozyra +4 more
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Bioinformatics, 2022 Abstract Motivation Amplicon sequencing is widely applied to explore heterogeneity and rare variants in genetic populations. Resolving true biological variants and quantifying their abundance is crucial for downstream analyses, but measured abundances are distorted by stochasticity and bias in ...
Xiyu Peng, Karin S Dorman
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BOOL-AN: A method for comparative sequence analysis and phylogenetic reconstruction [PDF]
, 2009 A novel discrete mathematical approach is proposed as an additional tool for molecular systematics which does not require prior statistical assumptions concerning the evolutionary process.
Ittzés, Péter +4 more
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Data incongruence and the problem of avian louse phylogeny [PDF]
, 2004 Recent studies based on different types of data (i.e. morphological and molecular) have supported conflicting phylogenies for the genera of avian feather lice (Ischnocera: Phthiraptera).
Page, R.D.M., Smith, V.S., Johnson, K.P.
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MBEToolbox: a Matlab toolbox for sequence data analysis in molecular biology and evolution [PDF]
BMC Bioinformatics, 2005 Abstract Background MATLAB is a high-performance language for technical computing, integrating computation, visualization, and programming in an easy-to-use environment. It has been widely used in many areas, such as mathematics and computation, algorithm development, data acquisition, modeling ...
James J. Cai +3 more
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Molecular footprints of the Holocene retreat of dwarf birch in Britain [PDF]
, 2014 © 2014 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original ...
Bodles, WJA +11 more
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