Results 21 to 30 of about 1,833,643 (261)
The Barcode of Life Data Portal: bridging the biodiversity informatics divide for DNA barcoding. [PDF]
PLoS ONE, 2011 With the volume of molecular sequence data that is systematically being generated globally, there is a need for centralized resources for data exploration and analytics.
Indra Neil Sarkar, Michael Trizna
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Genesis of avian influenza H9N2 in Bangladesh
Emerging Microbes and Infections, 2014 Avian influenza subtype H9N2 is endemic in many bird species in Asia and the Middle East and has contributed to the genesis of H5N1, H7N9 and H10N8, which are potential pandemic threats.
Karthik Shanmuganatham +9 more
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Molecular phylogeny of Asian Meconopsis based on nuclear ribosomal and chloroplast DNA sequence data. [PDF]
PLoS ONE, 2014 The taxonomy and phylogeny of Asian Meconopsis (Himalayan blue poppy) remain largely unresolved. We used the internal transcribed spacer (ITS) region of nuclear ribosomal DNA (nrDNA) and the chloroplast DNA (cpDNA) trnL-F region for phylogenetic ...
Yu-Cheng Liu +3 more
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Foot-and-Mouth Disease Virus Serotype A in Egypt
Emerging Infectious Diseases, 2007 We describe the characterization of a foot-and-mouth disease (FMD) serotype A virus responsible for recent outbreaks of disease in Egypt. Phylogenetic analysis of VP1 nucleotide sequences demonstrated a close relationship to recent FMD virus isolates ...
Nick J. Knowles +12 more
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SEView: A Java Applet for Browsing Molecular Sequence Data
In Silico Biology: Journal of Biological Systems Modeling and Multi-Scale Simulation, 1998 SEView is a Java applet that represents known or predicted elements of a protein or nucleotide sequence. It replaces or supplements the textual format of databases or program output with an interactive, graphical representation that is easily available through a WWW browser.
Thomas Junier, Philipp Bucher
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Biodiversity Data Journal, 2016 We demonstrate how a classical taxonomic description of a new species can be enhanced by applying new generation molecular methods, and novel computing and imaging technologies.
Pavel Stoev +16 more
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The detection of linkage disequilibrium in molecular sequence data. [PDF]
Genetics, 1995 Abstract Studies of genetic variation in natural populations at the sequence level usually show that most polymorphic sites are very asymmetrical in allele frequencies, with the rarer allele at a site near fixation. When the rarer allele at a site is present only a few times in the sample, say below five representatives, it becomes very ...
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Learning the Regulatory Code of Gene Expression
Frontiers in Molecular Biosciences, 2021 Data-driven machine learning is the method of choice for predicting molecular phenotypes from nucleotide sequence, modeling gene expression events including protein-DNA binding, chromatin states as well as mRNA and protein levels.
Jan Zrimec +6 more
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AlphaFold Protein Structure Database for Sequence-Independent Molecular Replacement
Crystals, 2021 Crystallographic phasing recovers the phase information that is lost during a diffraction experiment. Molecular replacement is a commonly used phasing method for crystal structures in the protein data bank.
Lawrence Chai +7 more
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Molecular Phylogenetics of Poaceae: An Expanded Analysis ofrbcL Sequence Data
Molecular Phylogenetics and Evolution, 1996 Phylogenetic analyses of rbcL sequence data from grasses are presented, extending the work of an earlier study. Based on molecular evidence that Joinvilleaceae and Restionaceae are closely allied to Poaceae, species from these families and from a distantly related dicot were variously employed as outgroups and analyzed with 23 species of Poaceae using ...
M R, Duvall, B R, Morton
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