Results 71 to 80 of about 80,509 (303)

MagmaFlow: A desktop platform for artificial intelligence‐driven expression analysis

open access: yesFEBS Open Bio, EarlyView.
MagmaFlow is a free, no‐code platform for gene expression analysis. It generates interactive volcano plots, links genes to literature, pathways, and diseases, prioritizes candidates using millions of publications, identifies affected biological processes, builds network diagrams, and exports publication‐ready figures and reports for macOS and Windows ...
Carlos E. Buss   +7 more
wiley   +1 more source

New approaches to the ontology alignment and identity resolution problems [PDF]

open access: yesComputer Science Journal of Moldova, 2014
This paper describes approaches to the vocabulary normalization and identity resolution problems arising during the use of the LOD datasets to populate the content of scholarly knowledge bases.
Zinaida Apanovich, Alexander Marchuk
doaj  

Biomedical ontology alignment with BERT. [PDF]

open access: yes, 2022
Existing machine learning-based ontology alignment systems often adopt complicated feature engineering or traditional non-contextual word embeddings. However, they are often outrun by the rule-based sys- tems despite the model complexity. This paper proposes a novel ontology alignment system based on a contextual embedding model named BERT, aiming to ...
He, Y   +3 more
openaire   +1 more source

Plasma EV Proteomics Identifies ECM Remodeling and Inflammatory Proteins LUM and C7 as Candidate Biomarkers in FSHD

open access: yesAnnals of Clinical and Translational Neurology, EarlyView.
ABSTRACT Objective Facioscapulohumeral muscular dystrophy (FSHD) is one of the most debilitating and common muscular dystrophies. Despite its severity, no approved therapy exists for FSHD patients. However, several therapeutic candidates are currently under development, and some have recently entered clinical trials, marking the need for reliable ...
Mustafa Bilal Bayazit   +11 more
wiley   +1 more source

Decentralized but Globally Coordinated Biodiversity Data

open access: yesFrontiers in Big Data, 2020
Centralized biodiversity data aggregation is too often failing societal needs due to pervasive and systemic data quality deficiencies. We argue for a novel approach that embodies the spirit of the Web (“small pieces loosely joined”) through the ...
Beckett W. Sterner   +2 more
doaj   +1 more source

Ontology Alignment: An annotated Bibliography

open access: yes, 2005
Ontology mapping, alignment, and translation has been an active research component of the general research on semantic integration and interoperability. In our talk, we gave our own classification of different topics in this research. We talked about types of heterogeneity between ontologies, various mapping representations, classified methods for ...
Noy, Natasha, Stuckenschmidt, Heiner
openaire   +4 more sources

Bootstrapping ontology alignment methods with APFEL [PDF]

open access: yesSpecial interest tracks and posters of the 14th international conference on World Wide Web - WWW '05, 2005
Ontology alignment is a prerequisite in order to allow for interoperation between different ontologies and many alignment strategies have been proposed to facilitate the alignment task by (semi-)automatic means. Due to the complexity of the alignment task, manually defined methods for (semi-)automatic alignment rarely constitute an optimal ...
Marc Ehrig, Steffen Staab, York Sure
openaire   +1 more source

Uncovering G Protein‐Coupled Receptors: Novel Targets and Biomarkers for Predicting Glioma Prognosis

open access: yesAnnals of Clinical and Translational Neurology, EarlyView.
ABSTRACT Background Low‐grade gliomas (LGG) exhibit significant heterogeneity and recurrence risk. G protein‐coupled receptors (GPCR) contribute to glioma malignant progression, but their prognostic value remains unclear. This work attempts to formulate a GPCR‐based outcome‐predicting model for LGG. Methods Based on TCGA LGG data, the enrichment scores
Jun Yang   +4 more
wiley   +1 more source

NFDI MatWerk Ontology (MWO): A BFO‐Compliant Ontology for Research Data Management in Materials Science and Engineering

open access: yesAdvanced Engineering Materials, EarlyView.
This article presents the NFDI‐MatWerk Ontology (MWO), a Basic Formal Ontology‐based framework for interoperable research data management in materials science and engineering (MSE). Covering consortium structures, research data management resources, services, and instruments, MWO enables semantic integration, Findable, Accessible, Interoperable, and ...
Hossein Beygi Nasrabadi   +4 more
wiley   +1 more source

Employing Ontology-Alignment and Locality-Sensitive Hashing to Improve Attribute Interoperability in Federated eID Systems

open access: yesComplex Systems Informatics and Modeling Quarterly, 2016
Achieving interoperability, i.e. creating identity federations between different Electronic identities (eID) systems, has gained relevance throughout the past years.
Walter Priesnitz Filho   +2 more
doaj   +1 more source

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