Pervasive translation of small open reading frames in plant long non-coding RNAs
Frontiers in Plant Science, 2022 Long non-coding RNAs (lncRNAs) are primarily recognized as non-coding transcripts longer than 200 nucleotides with low coding potential and are present in both eukaryotes and prokaryotes.
K. Bharathan Sruthi +3 more
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NAD+-dependent DNA ligases of Mycobacterium tuberculosis and Streptomyces coelicolor [PDF]
, 2003 Sequencing of the genomes of Mycobacterium tuberculosis H37Rv and Streptomyces coelicolor A3(2) identified putative genes for an NAD+-dependent DNA ligase. We have cloned both open reading frames and overexpressed the protein products in Escherichia coli.
Bowater, Richard +6 more
core +1 more source
De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy.
PLoS ONE, 2014 BackgroundPerennial ryegrass is a highly heterozygous outbreeding grass species used for turf and forage production. Heterozygosity can affect de-Bruijn graph assembly making de novo transcriptome assembly of species such as perennial ryegrass ...
Jacqueline D Farrell +3 more
doaj +1 more source
MetAMOS: A modular and open source metagenomic assembly and analysis pipeline [PDF]
, 2013 © 2013 Treangen et al. We describe MetAMOS, an open source and modular metagenomic assembly and analysis pipeline. MetAMOS represents an important step towards fully automated metagenomic analysis, starting with next-generation sequencing reads and ...
Astrovskaya, I +8 more
core +5 more sources
In silico protein prediction of the 16S ribosomal RNA gene from novel rhizobacterium Bacillus cereus UPMLH24 [PDF]
, 2014 In this study, computational methods were used to predict information hidden in the small subunit 16S rRNA gene from newly isolated plant growth-promoting rhizobacteria B. cereus strain UPMLH24.
Abdul Aziz, Zakry Fitri +3 more
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Genome sequence of canine herpesvirus [PDF]
, 2016 Canine herpesvirus is a widespread alphaherpesvirus that causes a fatal haemorrhagic disease of neonatal puppies. We have used high-throughput methods to determine the genome sequences of three viral strains (0194, V777 and V1154) isolated in the United ...
Davison, Andrew +5 more
core +2 more sources
Draft Genome Sequences of Salinivibrio proteolyticus, Salinivibrio sharmensis, Salinivibrio siamensis, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. vallismortis, and 29 New Isolates Belonging to the Genus Salinivibrio [PDF]
, 2017 The draft genome sequences of 5 type strains of species of the halophilic genus Salinivibrio and 29 new isolates from different hypersaline habitats belonging to the genus Salinivibrio have been determined. The genomes have 3,123,148 to 3,641,359 bp, a G+
Antonio Ventosa +5 more
core +2 more sources
Biochemical and Biophysical Research Communications, 2000 The suppressor of cytokine signalling 1 protein (SOCS-1) belongs to a novel family of cytokine inducible factors which function as inhibitors of the JAK/STAT pathway. While SOCS-1 previously has been described as a single-exon gene, here we present evidence for an additional 5' exon, separated by a 509 bp intron from exon 2.
Schluter, G. +2 more
openaire +3 more sources
C12orf5 (chromosome 12 open reading frame 5) [PDF]
Atlas of Genetics and Cytogenetics in Oncology and Haematology, 2014 Review on C12orf5, with data on DNA/RNA, on the protein encoded and where the gene is implicated.
Simon, H +5 more
openaire +3 more sources
Translational control of the human hemojuvelin via upstream open reading frames [PDF]
, 2012 Iron is an essential element for many biological reactions carried out by living systems. A tight regulation of systemic iron homeostasis is crucial to avoid the pathological conditions of iron deficiency or overload.
Barbosa, Cristina +2 more
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