Results 91 to 100 of about 3,202 (209)

Comparative genomics of different haplotypes in Ditylenchus destructor provides insights into their host preferences

Communications Biology
The nematode Ditylenchus destructor comprises multiple haplotypes with distinct host preferences, while the genetic basis remains unclear. We generate three genomes (Haplotypes A, B, and C) using hybrid assembly and conduct comparative analysis with two ...
Zhengyang Zhao, Hongxia Zhang, Jiayu Wang, Ning Luo, Huixia Li, Runmao Lin, Bingyan Xie   +6 more
doaj   +1 more source

Genomic Insights Into the Body Size Evolution in Felidae (Mammalia: Carnivora)

Ecology and Evolution, Volume 16, Issue 9, September 2026.
This study performed reannotation of the genomes of two felid species and conducted the first genomic analysis of body size variation and evolution in Felidae. Our results demonstrate that felid body size evolution is driven by adaptive changes in both core signaling pathways and individual key genes.
Shihu Zhao, Tian Xia, Xuesong Mei, Chen Qiu, Ying Zhang, Chao Zhao, Xiaoyang Wu, Xiaodong Gao, Jiaohui Fang, Jianqun Ding, Zhenglong Wang, Xiufeng Yang, Honghai Zhang   +12 more
wiley   +1 more source

A high‐quality haplotype‐resolved genome of Pyrus calleryana provides insights into adaptive gene families

The Plant Genome, Volume 19, Issue 3, September 2026.
Abstract Callery pear (Pyrus calleryana) is a deciduous species native to East Asia with notable ornamental and ecological value, but the genomic resources for this species remain limited. Here, we report the first haplotype‐resolved, chromosome‐scale genome of P. calleryana.
Xiaogang Dai, Xiaoyue Yang, Changci Jiang, Lizhen Huang, Fangping Li, Zhuangwei Hou, Fenghou Shi, Zefu Wang, Wenjie Yang, Yongbao Shen   +9 more
wiley   +1 more source

Additional file 17: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

, 2019
Every sugar transporter gene, their strongest stage of expression, clade and orthogroup. The clade, stage of strongest expression and orthogroup are listed for genes in the A) MST, B) SUT and C) SWEET families.
Yu Wang (12152), Claude dePamphilis (3246285), Michael Timko (4612192), Vikram Misra (470450), Eric Wafula (4476616)   +4 more
core   +1 more source

The landscape and evolutionary dynamics of derived lncRNAs in insects

Communications Biology
Long noncoding RNAs (lncRNAs) function as crucial regulatory elements in eukaryotes, yet have remained largely unexplored across diverse insect lineages. We present a comprehensive analysis of lncRNA atlases across 115 insect species, identifying 647,691
Dong Jing, Yang Mei, Hang Zhou, Chenghao Huang, Zuoqi Wang, Shuo Jin, Hao Chen, Haonan Duanmu, Ying Liu, Fei Li, Kang He   +10 more
doaj   +1 more source

GWAS With a Global Population of Wheat Stripe Rust Identified High‐Confidence Avirulence Gene Candidates

Molecular Plant Pathology, Volume 27, Issue 9, September 2026.
Integrating global Pst genomes and phenotypes reveals high‐confidence Avr candidate genes, stark geographic population structure, modelling interactions and validating the physical interaction between AvYr9 candidate (Pst_SP05) and Yr9. ABSTRACT Wheat stripe rust, caused by Puccinia striiformis f. sp.
Siyue Zhang, Jiaxue Peng, Zihan Fu, Yuxiang Li, Qiang Yao, Xiaoping Hu   +5 more
wiley   +1 more source

Additional file 16: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

, 2019
The clades with which each orthogroup is most strongly associated. These orthogroups were identified in the A) MST, B) SUT and C) SWEET families. Note that many sugar transporter clades have at least one orthogroup that is unique to them.
Yu Wang (12152), Claude dePamphilis (3246285), Michael Timko (4612192), Vikram Misra (470450), Eric Wafula (4476616)   +4 more
core   +1 more source

Additional file 4 of Genome-wide characterization, evolution, structure, and expression analysis of the F-box genes in Caenorhabditis

, 2021
Additional file 4: Figure S4. The number of genes with and without F-box domains in each F-box orthogroup. The Y-axis is the number of orthologous genes in each orthogroup, while the X-axis represents the sequence number. The blue and gray boxes indicate
Shiheng Tao (11826251), Wei Chen (23863), Ailan Wang (528265)   +2 more
core   +1 more source

Pan-Genome-Scale Metabolic Reconstruction Reveals Conserved Metabolic Functions in Candida albicans

Journal of Fungi
Candida albicans is a major cause of human mucosal and invasive fungal infections, but the relationship between its intraspecific genomic diversity and metabolic variation remains poorly understood. Here, we integrated 80 public C.
Ya Meng, Yiming Zhang, Lei Zhang
doaj   +1 more source

Rational reduction of a sorghum SynCom that preserves growth promotion reveals flavonoid‐mediated plant–microbe interactions

New Phytologist, Volume 251, Issue 6, Page 3507-3521, September 2026.
Synthetic community complexity reduction designs. Summary Plant growth is influenced by the composition of its associated microbiome. The inherent complexity and functional redundancy of natural plant microbiomes present a formidable barrier to understanding the myriad biological interactions therein.
Dean Pettinga, Citlali Fonseca‐García, Genevieve Krause, Hannah Ploemacher, Travis Wheeler, Chaevien S. Clendinen, Pubudu Handakumbura, Robert Egbert, Devin Coleman‐Derr   +8 more
wiley   +1 more source