Results 91 to 100 of about 2,919 (208)
Structure and sequence evolution in the pennycress (Thlaspi arvense) pangenome
New Phytologist, Volume 250, Issue 5, Page 2723-2741, June 2026.Summary Eukaryotic genomes harbor many forms of variation, including nucleotide diversity and structural polymorphisms, which experience natural selection and contribute to genome evolution and biodiversity. Harnessing this variation for agriculture hinges on our ability to detect, quantify, catalog, and deploy genetic diversity. Here, we explore seven
Kevin A. Bird +25 more
wiley +1 more source
, 2018 Orthogroups were inferred with OrthoFinder version 0.4.0. Since orthogroups are defined as the set of genes that are descended from a single gene in the last common ancestor of all the species being considered, they can comprise orthologous as well as ...
Rens Holmer (7062656) +61 more
core +1 more source
, 2021 Additional file 4: Figure S4. The number of genes with and without F-box domains in each F-box orthogroup. The Y-axis is the number of orthologous genes in each orthogroup, while the X-axis represents the sequence number. The blue and gray boxes indicate
Shiheng Tao (11826251) +2 more
core +1 more source
Plant CommunicationsOlive (Olea europaea) is one of the most important crop trees, with olive oil being a key ingredient of the Mediterranean diet. Oleuropein, an oleoside-type secoiridoid, is the major determinant of olive oil flavor and quality.
Ornella Calderini +16 more
doaj +1 more source
LUCID: An Integrative Approach for Target Discovery and dsRNA Design in Plant Fungal Pathogens
Plant Biotechnology Journal, Volume 24, Issue 6, Page 3597-3615, June 2026.LUCID: A computational pipeline for RNAi‐based biofungicide design. ABSTRACT Phytopathogenic fungi pose an escalating threat to global food security and ecosystem stability, as resistance and environmental concerns diminish the effectiveness of conventional fungicides.
Lucía Jiménez‐Castro +4 more
wiley +1 more source
Summary statistics per orthogroup.
, 2023 Plant pathogens secrete proteins called effectors that target host cellular processes to promote disease. Recently, structural genomics has identified several families of fungal effectors that share a similar three-dimensional structure despite ...
Jérôme Gracy (6464) +10 more
core +1 more source
BMC Genomics, 2018 Background Salmonid fishes exhibit high levels of phenotypic and ecological variation and are thus ideal model systems for studying evolutionary processes of adaptive divergence and speciation.
Madeleine Carruthers +5 more
doaj +1 more source
Plant Biotechnology Journal, Volume 24, Issue 6, Page 4285-4301, June 2026.ABSTRACT Belamcanda chinensis is a non‐leguminous medicinal plant rich in bioactive isoflavones; however, the lack of a high‐quality reference genome has limited elucidation of its isoflavone biosynthetic and modification network. Here, we present the first near telomere‐to‐telomere genome assembly of B.
Yuan‐Yuan Wang +10 more
wiley +1 more source
Population structure in a fungal human pathogen is potentially linked to pathogenicity
Nature CommunicationsAspergillus flavus is a clinically and agriculturally important saprotrophic fungus responsible for severe human infections and extensive crop losses. Here, we analyze genomic data from 300 (117 clinical and 183 environmental) A.
E. Anne Hatmaker +11 more
doaj +1 more source
Plant, Cell &Environment, Volume 49, Issue 6, Page 3003-3021, June 2026.ABSTRACT Alnus glutinosa is one of only three lineages within the order Fagales capable of establishing root nodule symbiosis (RNS). Although a fragmented genome assembly of A. glutinosa was previously available, its limited quality, combined with the lack of comprehensive transcriptomic resources, has constrained in‐depth comparative and functional ...
Zijian Liu +11 more
wiley +1 more source