Results 101 to 110 of about 3,202 (209)

Out of the blue: family‐wide loss of anthocyanin biosynthesis in Cucurbitaceae

open access: yesThe Plant Journal, Volume 127, Issue 6, September 2026.
Significance Statement Anthocyanins are nearly universal plant pigments, making their evolutionary loss unexpected. Phylogenomics across Cucurbitaceae reveals the consistent absence of key structural and regulatory genes in the anthocyanin and proanthocyanidin pathways, indicating a family‐wide pathway loss. We propose Cucurbitaceae as a ‘natural knock‐
Nancy Choudhary   +2 more
wiley   +1 more source

List of Pyricularia (syn. Magnaporthe) oryzae entries in the 94 MAX effector orthogroup (OG) clusters.

open access: yes
List of Pyricularia (syn. Magnaporthe) oryzae entries in the 94 MAX effector orthogroup (OG) clusters.
Mounia Lahfa (18510342)   +12 more
core   +1 more source

Summary statistics per orthogroup.

open access: yes, 2023
Plant pathogens secrete proteins called effectors that target host cellular processes to promote disease. Recently, structural genomics has identified several families of fungal effectors that share a similar three-dimensional structure despite ...
Jérôme Gracy (6464)   +10 more
core   +1 more source

The telomere‐to‐telomere gap‐free reference genome and DNA methylome unveil epigenetic regulation of proanthocyanidin biosynthesis during apricot fruit development

open access: yesThe Plant Journal, Volume 127, Issue 6, September 2026.
SUMMARY Apricot (Prunus armeniaca L.) is an economically significant fruit crop worldwide with remarkable germplasm diversity, and its fruit quality is primarily determined by key metabolites (e.g., sugars, organic acids, and flavonoids). However, current apricot genome assemblies remain incomplete, with substantial unanchored regions that hamper ...
Xu Qiang   +10 more
wiley   +1 more source

Phytophthora cactorum genes in orthogroups shared with characterized P. infestans RxLR candidates.

open access: yes, 2018
Orthogroup assignment shows conservation of these genes throughout Phytophthora spp. Numbers of genes in each orthogroup are shown for P. cactorum (Pcac), P. parasitica (Ppar), P. infestans (Pinf), P. capsici (Pcap) and P. sojae (Psoj).
Laura A. Lewis (5811185)   +6 more
core   +1 more source

Phylogenomic and orthogroup trees

open access: yes, 2021
Trees in nexus format for all phylogenomic analyses and single marker trees for all studied ...
Luis Javier Galindo (6432803)   +1 more
core   +1 more source

Functional annotations of Phytophthora cactorum RxLR candidates.

open access: yes, 2018
Orthogroup assignment shows conservation of these genes throughout Phytophthora spp. Numbers of genes in each orthogroup are shown for P. cactorum (Pcac), P. parasitica (Ppar), P. infestans (Pinf), P. capsici (Pcap) and P. sojae (Psoj).
Laura A. Lewis (5811185)   +6 more
core   +1 more source

Table S6

open access: yes, 2019
Orthogroup (protein cluster) analysis based on all 13 genomes from Loki- and Thorarchaeota. Functional annotation for each of the orthogroups was predicted based on the majority rule of the proteins within each orthogroup.
Lokeshwaran Manoharan (4165459)
core   +1 more source

Genome and secretome of Chondrostereum purpureum correspond to saprotrophic and phytopathogenic life styles.

open access: yesPLoS ONE, 2019
The basidiomycete Chondrostereum purpureum (Silverleaf fungus) is a saprotroph and plant pathogen commercially used for combatting forest "weed" trees in vegetation management.
Rocio Reina   +7 more
doaj   +1 more source

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