Results 81 to 90 of about 3,202 (209)

Genome-scale comparative analysis for host resistance against sea lice between Atlantic salmon and rainbow trout

Scientific Reports, 2021
Sea lice (Caligus rogercresseyi) is an ectoparasite which causes major production losses in the salmon aquaculture industry worldwide. Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss) are two of the most susceptible salmonid species ...
Pablo Cáceres, Agustín Barría, Kris A. Christensen, Liane N. Bassini, Katharina Correa, Baltasar Garcia, Jean P. Lhorente, José M. Yáñez   +7 more
doaj   +1 more source

T2T Genome Assembly and Multi‐Omics Data Reveal Terrestrial Adaptation and Mucus Biosynthesis in Tropical Leatherleaf Slug (Laevicaulis alte)

Advanced Science, Volume 13, Issue 51, 14 September 2026.
A gap‐free genome assembly and multi‐omics comparison of the terrestrial slug Laevichaulis alte with an aquatic relative reveal that expansion of the VEGF family orchestrates mucus production, lipid metabolism, and immune defense—highlighting key molecular innovations for conquering life on land.
Gang Wang, Shaofang He, Zhongkai Wang, Aobo Pang, Xiaoli Sun, Rongchen Liu, Fang Wang, Sisi Chen, Zhijuan Bian, Dongcheng Wei, Liuhan Wu, Siyao Zhao, Qiuting Ji, Yiqi Sun, Niying Sun, Yushinta Fujaya, Boping Tang, Kianann Tan, Daizhen Zhang, Lianfu Chen   +19 more
wiley   +1 more source

A chromosome-level genome assembly of the native populations of the Japanese pavement ant, Tetramorium tsushimae Emery (Hymenoptera: Formicidae)

Scientific Data
The Japanes pavement ant, Tetramorium tsushimae Emery is an ecologically significant ant species recognized for its mutualistic interactions with aphids and other hemipterans.
Anandapadmanaban Gokulanathan, Sol-Moon Na, Soo-Jung Suh   +2 more
doaj   +1 more source

Tandem Duplication‐Driven Neofunctionalization of UDP‐Glycosyltransferases Shapes the Diversification of Triterpenoid Saponins in the Cucurbitaceae

Advanced Science, Volume 13, Issue 51, 14 September 2026.
We present a chromosome‐level genome assembly of Siraitia grosvenorii and, through comparative genomics, uncover a conserved UGT73 tandem array driving triterpenoid saponin diversification in Cucurbitaceae. Crystalized SgUGT73AM30 further reveals the regioselectivity mechanism underlying its catalytic activity.
Guangyi Wang, Mengmeng Li, Xuehui Dai, Yanchen Zhang, Yuhan Wu, Zhaotao Yan, Chenfei Tian, Hongkai Fan, Haili Liu, Xiaowei Zhang, Yiming Yang, Jiayu Lu, Yuwei Sun, Yong Wang   +13 more
wiley   +1 more source

Metagenomic Association Uncovers Host Genotype‐Structured Rhizobacterial Networks and Novel Taxa That Enhance Soybean Salt Tolerance

Advanced Science, Volume 13, Issue 53, 24 September 2026.
An STI‐guided metagenomic association framework links soybean salt‐tolerance phenotypes with rhizosphere microbiome composition and network organization in natural saline soils. The approach identifies candidate beneficial taxa, including Thalassospira xiamenensis, and provides an efficient strategy for mining stress‐protective microbes from native ...
Yu Luo, Feng‐Li Kang, Qi‐Min Li, Wei‐Cai Yang   +3 more
wiley   +1 more source

Evolutionary Reorganization of Transcriptomic Architecture Across a UVB Tolerance Gradient in Fish

Ecology and Evolution, Volume 16, Issue 9, September 2026.
Environmental stress can drive adaptation through changes in transcriptomic organization. Across a UVB tolerance gradient in fish, adaptive responses were associated with increasingly coordinated and functionally specialized transcriptomic networks built upon a conserved functional background.
Camilo Valdivieso, Miguel Luis Allende
wiley   +1 more source

Orthogroup inference

, 2018
Orthogroups were inferred with OrthoFinder version 0.4.0. Since orthogroups are defined as the set of genes that are descended from a single gene in the last common ancestor of all the species being considered, they can comprise orthologous as well as ...
Rens Holmer (7062656), Rutten, Luuk, Qingqin Cao (1888198), Güngör, Berivan, Shen, Defeng, Sharma, Trupti, van den Hoogen, D. Johan, Renze Heidstra (4082), M. Eric Schranz (7330298), Menno Schilthuizen (352625), D. Johan van den Hoogen (7062665), Ton Bisseling (57687), Trupti Sharma (507733), Kana Miyata (2498398), Heidstra, Renze, Arjan van Zeijl (3493877), Roswanjaya, Yuda, Elena Fedorova (465219), Liu, Wei, Luca Santuari (171805), Verver, Jan, Schranz, M. Eric, Defeng Shen (4415953), Smit, Sandra, Miyata, Kana, Rene Geurts (3572336), Elio Schijlen (116974), Hontelez, Jan, Wouter Kohlen (3470654), Holmer, Rens, Kohlen, Wouter, Titis A.K. Wardhani (8150631), Santuari, Luca, Hartog, Marijke, Schilthuizen, Menno, Wardhani, Titis A.K., Fedorova, Elena, Jan Verver (7062674), Jan Hontelez (7062671), Joelle Jansen (7062662), Berivan Güngör (7062668), Yuda Roswanjaya (7062659), Bu, Fengjiao, Sandra Smit (11638), van Velzen, Robin, Bisseling, Ton, Geurts, Rene, Robin van Velzen (187767), Fengjiao Bu (4912720), van Zeijl, Arjan, Cao, Qingqin, Marijke Hartog (4912717), Schijlen, Elio, Luuk Rutten (4912735), Wei Liu (20030), Yang, Wei-Cai, Maryam Seifi Kalhor (8030288), Seifi Kalhor, Maryam, Rimi Repin (5031035), Repin, Rimi, Wei-Cai Yang (326681), Jansen, Joelle   +61 more
core   +1 more source

Dual life history of Biscogniauxia barriae sp. nov. (Xylariales, Graphostromataceae) as a Douglas-fir foliar endophyte and hardwood saprotroph [PDF]

MycoKeys
Biscogniauxia species are typically recognized by carbonaceous stromata on woody substrates, but some also occur as asymptomatic endophytes and may shift ecological roles across hosts and substrates. Here, Biscogniauxia barriae sp. nov.
Joey B. Tanney, Nicolas Feau, Yu-Ming Ju
doaj   +3 more sources

Reference‐Guided Chromosome‐Scale Genome Assembly With Insights on Population Genomics of the Atlantic Goliath Grouper (Epinephelus itajara), Islas del Rosario, Colombia

Ecology and Evolution, Volume 16, Issue 9, September 2026.
We present a high‐quality chromosome‐level genome assembly and population genomic analysis of the critically endangered Goliath grouper (Epinephelus itajara) using PacBio HiFi and Illumina sequencing technologies. The 1.12 Gb genome assembly showed high contiguity and identified 22,692 protein‐coding genes, while comparative analyses revealed conserved
Juan Esteban Jácome Castro, José Gregorio Martínez, Jaime Rojas, Nadine Hakim, Diego Alejandro Quiroga, Jorge Duitama, Susana Caballero   +6 more
wiley   +1 more source

Representative sequences of the 94 MAX effector orthogroup clusters.

Representative sequences of the 94 MAX effector orthogroup clusters.
Mounia Lahfa (18510342), Mouna Raji (18510345), Pierre Gladieux (38299), Stella Cesari (417448), Thomas Kroj (274072), Nathalie Declerck (2302288), Jérôme Gracy (6464), Philippe Barthe (1559923), Christian Roumestand (261108), Marie Le Naour—Vernet (16965108), André Padilla (486817), François Hoh (619688), Karine de Guillen (818638)   +12 more
core   +1 more source