Results 171 to 180 of about 44,664 (289)

Biomolecular Interaction Prediction in the Pre‐ and Post‐AlphaFold Era: The 8th CAPRI Evaluation

open access: yesProteins: Structure, Function, and Bioinformatics, EarlyView.
ABSTRACT We report on the 8th CAPRI Evaluation period, capturing the assessment of CAPRI Rounds 47 to 55 (excluding the CASP and COVID‐related Rounds), which have witnessed the transition to AI‐driven prediction tools such as AlphaFold and related alternatives. The prediction Rounds in this evaluation are characterized by a high level of difficulty due
Marc F. Lensink   +5 more
wiley   +1 more source

Construction and Characterization of a Novel Direct Electron Transfer Type Enzymatic Sensor Using Spermidine Dehydrogenase. [PDF]

open access: yesBiosensors (Basel)
Tong S   +9 more
europepmc   +1 more source

Molecular Dynamics Analysis of Inhibitor Binding Interactions in the Vibrio cholerae Respiratory Complex NQR

open access: yesProteins: Structure, Function, and Bioinformatics, EarlyView.
ABSTRACT The sodium‐pumping ubiquinone oxidoreductase sodium pumping quinone reductase (NQR) is an important enzyme in the respiratory chain of multiple pathogenic gram‐negative bacteria. NQR has been proposed as a viable antibiotic target due to its importance in supporting energy‐consuming reactions and its absence in human cells.
Joseph. A. DePaolo‐Boisvert   +3 more
wiley   +1 more source

Integrated metabarcoding and culture-dependent assessments reveal <i>Pseudomonas</i> as dominant hyphosphere-pathobiont in Race 4 <i>Fusarium</i> wilt pathogen of cotton. [PDF]

open access: yesFront Microbiol
Antony-Babu S   +12 more
europepmc   +1 more source

A Cytochrome b/c1 Complex with Ubiquinol–Cytochrome c2 Oxidoreductase Activity from Rhodopseudomonas sphaeroides GA [PDF]

open access: bronze, 1982
Nadia Gabellini   +4 more
openalex   +1 more source

Performance of pyDock in 8th CAPRI: Energy‐Based Scoring Applied to Docking and AlphaFold Models

open access: yesProteins: Structure, Function, and Bioinformatics, EarlyView.
ABSTRACT The 8th CAPRI edition has shown a significant evolution in the field of protein–protein complex structure prediction. We have participated in all 11 targets proposed in this edition, involving domain‐domain, protein–protein, protein‐peptide, and protein‐DNA interactions, including homo‐ and hetero‐meric interfaces.
Luis Angel Rodríguez‐Lumbreras   +5 more
wiley   +1 more source

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