Results 1 to 10 of about 47,490 (285)

Genome-wide methylation detection and episignature analysis using PacBio long-read sequencing [PDF]

open access: yesGenome Medicine
Background The detection of 5-methylcytosine (5mC) patterns in the human genome is relevant for the diagnosis of various genetic conditions. Genome-wide methylation episignatures provide a new approach for resolving variants of uncertain significance ...
Véronique Ivashchenko   +14 more
doaj   +2 more sources

The complete mitochondrial genome of the Atlantic spiny lumpsucker Eumicrotremus spinosus (Fabricius, 1776)

open access: yesMitochondrial DNA. Part B. Resources, 2023
The complete mitogenome of the Atlantic spiny lumpsucker (Eumicrotremus spinosus) was generated using the PacBio Sequel II HiFi sequencing platform. The mitogenome assembly has a length of 19,281 bp and contains 13 protein-coding sequences, 22 tRNA genes,
Likith R. Pinninti   +6 more
doaj   +1 more source

A Comparative Transcriptional Landscape of Two Castor Cultivars Obtained by Single-Molecule Sequencing Comparative Analysis

open access: yesFrontiers in Genetics, 2021
Background and Objectives: Castor (Ricinus communis L.) is an important non-edible oilseed crop. Lm-type female strains and normal amphiprotic strains are important castor cultivars, and are mainly different in their inflorescence structures and leaf ...
Yaxing Zhou   +4 more
doaj   +1 more source

Characterization of protein isoform diversity in human umbilical vein endothelial cells via long-read proteogenomics

open access: yesRNA Biology, 2022
Endothelial cells (ECs) comprise the lumenal lining of all blood vessels and are critical for the functioning of the cardiovascular system. Their phenotypes can be modulated by alternative splicing of RNA to produce distinct protein isoforms.
Madison M. Mehlferber   +9 more
doaj   +1 more source

The Gossypium longicalyx Genome as a Resource for Cotton Breeding and Evolution

open access: yesG3: Genes, Genomes, Genetics, 2020
Cotton is an important crop that has made significant gains in production over the last century. Emerging pests such as the reniform nematode have threatened cotton production.
Corrinne E. Grover   +11 more
doaj   +1 more source

Reference Genome Assembly for Australian Ascochyta rabiei Isolate ArME14

open access: yesG3: Genes, Genomes, Genetics, 2020
Ascochyta rabiei is the causal organism of ascochyta blight of chickpea and is present in chickpea crops worldwide. Here we report the release of a high-quality PacBio genome assembly for the Australian A. rabiei isolate ArME14.
Ramisah Mohd Shah   +7 more
doaj   +1 more source

Long-Read Genome Sequence of the Sugar Beet Rhizosphere Mycoparasite Pythium oligandrum

open access: yesG3: Genes, Genomes, Genetics, 2020
Pythium oligandrum is a soil born free living oomycete able to parasitize fungi and oomycetes prey, including important plant and animals pathogens. Pythium oligandrum can colonize endophytically the root tissues of diverse plants where it induces plant ...
Charlène Faure   +12 more
doaj   +1 more source

The complete mitochondrial genome of Eaton’s skate, Bathyraja eatonii (Rajiformes, Arhynchobatidae)

open access: yesMitochondrial DNA. Part B. Resources, 2021
The complete mitochondrial genome of Eaton’s skate Bathyraja eatonii was studied using the long-read technology, PacBio Sequel System. The complete mitochondrial genome form of B.
Jinmu Kim   +8 more
doaj   +1 more source

A mitochondrial genome assembly of the opal chimaera, Chimaera opalescens Luchetti, Iglésias et Sellos 2011, using PacBio HiFi long reads

open access: yesMitochondrial DNA. Part B. Resources, 2022
Chondrichthyans (sharks, rays and chimeras) are a fascinating and highly vulnerable group of early branching gnathostomes. However, they remain comparatively poorly sampled from the point of view of molecular resources, with deep water taxa being ...
Nair Vilas-Arrondo   +10 more
doaj   +1 more source

The complete mitochondrial genome of Trematomus loennbergii (Perciformes, Nototheniidae)

open access: yesMitochondrial DNA. Part B. Resources, 2021
The complete mitochondrial genome of Trematomus loennbergii was studied using NGS technology with PacBio platform. The mitochondrial genome size was 19,374bp and it had 13 protein-coding genes, 22 tRNAs and 2 rRNAs.
Eunkyung Choi   +8 more
doaj   +1 more source

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