Pan-genome-wide characterization of the ascorbate peroxidase gene family reveals evolutionary dynamics and salt-responsive mechanisms in Fraxinus. [PDF]
Hou C, Yan L, Liu W, Liu JN, Liu Z.
europepmc +1 more source
A Pan‐Methylome Framework for Population‐Scale Bacterial Epigenomics
A scalable quantitative framework unlocks population‐level comparative epigenomics in bacteria. By transforming site‐level data into standardized traits, this approach reconstructs methylation‐informed phylogenies and defines the core epigenome.
Bin Ma +22 more
wiley +1 more source
Pan-Genome Analysis of the Fructokinase Gene Family Reveals a Light-Regulated SiPhyC-SiFRK4 Module Controlling Carbon Partitioning in Foxtail Millet. [PDF]
He L +5 more
europepmc +1 more source
AI‐Driven Cancer Multi‐Omics: A Review From the Data Pipeline Perspective
The exponential growth of cancer multi‐omics data brings opportunities and challenges for precision oncology. This review systematically examines AI's role in addressing these challenges, covering generative models, integration architectures, Explainable AI for clinical trust, clinical applications, and key directions for clinical translation.
Shilong Liu, Shunxiang Li, Kun Qian
wiley +1 more source
Insights into novel diagnostic assay development, antimicrobial resistance, and pathogenicity in <i>Proteus mirabilis</i> through pan-genome analysis. [PDF]
Yin Z +9 more
europepmc +1 more source
Genomic adaptability and virulence of Bacillus anthracis: a machine learning-based pan-genome and comparative analysis. [PDF]
Sekar YS +15 more
europepmc +1 more source
ABSTRACT Arthrogryposis multiplex congenita (AMC) is a group of rare congenital conditions, characterized by multiple joint contractures but may involve any body system including central nervous system. AMC is etiologically heterogeneous, with over 400 genetic and many non‐genetic causes implicated in its prenatal development.
Shahrzad Nematollahi +20 more
wiley +1 more source
Re‐envisioning the Ligandable Proteome: Reactive Metallo‐Scaffolds (r‐mS) combine non‐covalent protein engagement by a metallo‐scaffold with covalent cysteine capture through a tethered chloroacetamide warhead. Chemoproteomic profiling reveals unique enzyme engagement including ligases, kinases and methyltransferases, highlighting opportunities for ...
Jessica E. Waters +15 more
wiley +2 more sources
Mitochondrial Graph-Based Pan-Genome Analysis of <i>Hypsizygus marmoreus</i>: Structural Variation, Adaptive Evolution, and Its Implications for Germplasm Resource Improvement. [PDF]
Ma R +9 more
europepmc +1 more source

