Results 31 to 40 of about 171,414 (293)
Towards a better understanding of the bacterial pan-genome [PDF]
, 2021 The bacterial pan-genome is a relatively new concept that refers to the number of genes observed in a given set of bacterial genome sequences, either at the intra- or inter-species level.
Kaca, Wiesław +4 more
core +1 more source
, 2022 This bachelor thesis deals with pan-genome analysis for bacterial populations. The first part specifies genome, pseudogenes, bacteria and its genome, and pan-genome including its components.
Lorková, Ema Marta
core +1 more source
, 2013 The distribution of the number of core COGs (A) and total pan-genome COGs (B) found upon sequential addition of n genomes. In panel A, an exponential regression to core genome data is shown as a solid curve.
Christian Milani (133915) +7 more
core +2 more sources
Prospects of pan-genomics in barley
Theoretical and Applied Genetics, 2018 The concept of a pan-genome refers to intraspecific diversity in genome content and structure, encompassing both genes and intergenic space. Pan-genomic studies employ a combination of de novo sequence assembly and reference-based alignment to discover and genotype structural variants.
Cécile Monat +3 more
openaire +3 more sources
Supplemental Core and Pan Genome Data
, 2023 Core and pan genome data from Pseudoalteromonas isolates from three deep sea basins.
Stephen Techtmann (16549146)
core +1 more source
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples
Nature Communications, 2020 With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes
Matthew H. Bailey +20 more
doaj +1 more source
PGAP: pan-genomes analysis pipeline [PDF]
Bioinformatics, 2011 Abstract Summary: With the rapid development of DNA sequencing technology, increasing bacteria genome data enable the biologists to dig the evolutionary and genetic information of prokaryotic species from pan-genome sight. Therefore, the high-efficiency pipelines for pan-genome analysis are mostly needed.
Yongbing Zhao +5 more
openaire +2 more sources
Seep-SRB2 pan-genome analysis.
, 2023 A pan-genome analysis of Seep-SRB1a clades was performed using Anvi’o [45] to demonstrate the conserved genes and differences within the syntrophic SRB clade Seep-SRB2. (XLSX)
Danielle Goudeau (8455311) +13 more
core +1 more source
The comprehensive pan-genome of Meloidae family
, 2023 Establishing the most comprehensive pan-genome for this family to date.
Jiang Li (11469070)
core +1 more source
Frontiers in Genetics, 2019 It is broadly expected that next generation sequencing will ultimately generate a complete genome as is the latest goat reference genome (ARS1), which is considered to be one of the most continuous assemblies in livestock.
Ran Li +12 more
doaj +1 more source