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A pan-Zea genome map for enhancing maize improvement
Genome Biology, 2022 Background Maize (Zea mays L.) is at the vanguard facing the upcoming breeding challenges. However, both a super pan-genome for the Zea genus and a comprehensive genetic variation map for maize breeding are still lacking.
Songtao Gui +12 more
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Plant pan-genomes are the new reference [PDF]
Nature Plants, 2020 Recent years have seen a surge in plant genome sequencing projects and the comparison of multiple related individuals. The high degree of genomic variation observed led to the realization that single reference genomes do not represent the diversity within a species, and led to the expansion of the pan-genome concept.
Philipp E. Bayer +4 more
openaire +5 more sources
Unity in Variety--The Pan-Genome of the Chlamydiae [PDF]
Molecular Biology and Evolution, 2011 Chlamydiae are evolutionarily well-separated bacteria that live exclusively within eukaryotic host cells. They include important human pathogens such as Chlamydia trachomatis as well as symbionts of protozoa. As these bacteria are experimentally challenging and genetically intractable, our knowledge about them is still limited.
Collingro A +13 more
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Frontiers in Microbiology, 2018 Corallococcus is an abundant genus of predatory soil myxobacteria, containing two species, C. coralloides (for which a genome sequence is available) and C. exiguus.
Paul G. Livingstone +2 more
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Graph-based pan-genome analysis reveals diversity of structural variations in native and commercial chicken [PDF]
Frontiers of Agricultural Science and EngineeringChickens are one of the most important domesticated animals, serving as an important protein source. Studying genetic variations in chickens to enhance their production performance is of great potential value.
Yiming WANG, Zijia NI, Yinhua HUANG
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, 2023 Outputs of pan-genome analyses performed by GET_HOMOLOGUES pipeline.
Nemanja Kuzmanovic (9883286)
core +1 more source
, 2021 A chickpea pan-genome to describe genomic diversity across cultivated chickpea and its wild progenitor ...
Rajeev Varshney (10103350)
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Reference-agnostic representation and visualization of pan-genomes
BMC Bioinformatics, 2021 Background The pan-genome of a species is the union of the genes and non-coding sequences present in all individuals (cultivar, accessions, or strains) within that species.
Qihua Liang, Stefano Lonardi
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Genomic characterization of Campylobacter jejuni strain M1. [PDF]
PLoS ONE, 2010 Campylobacter jejuni strain M1 (laboratory designation 99/308) is a rarely documented case of direct transmission of C. jejuni from chicken to a person, resulting in enteritis. We have sequenced the genome of C.
Carsten Friis +10 more
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