Results 41 to 50 of about 1,691,339 (303)
Pan-genome analyses - GET_HOMOLOGUES and GET_PHYLOMARKERS
, 2022 Outputs of pan-genome analyses performed by GET_HOMOLOGUES pipeline.The GET_HOMOLOGUES analysis was run on the following datasets:- 14 All. vitis species complex strains and four Allorhizobium spp. (All. oryziradicis N19T, All. taibaishanense 14971T, All.
Nemanja Kuzmanovic (9883286)
core +1 more source
, 2016 Raw tree file for pan-genome tree of Salmonella enterica ssp ...
Pimlapas Leekitcharoenphon (505537) +6 more
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Pan-genome and core genome among Helicobacter pylori.
, 2016 (A) Histogram showing the distribution of the number of strains in each OG among the 30 strains. Sets of OGs corresponding to pan-genome, universal core, accessory, and unique OGs are indicated.
Ichizo Kobayashi (29889) +5 more
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An epithelial GPR35 isoform supports tumor‐associated transcriptional and metabolic phenotypes
FEBS Letters, EarlyView.GPR35 generates two functionally distinct isoforms with previously unresolved roles. GPR35‐short mediates immune‐cell chemotaxis, while GPR35‐long is enriched in colorectal cancer epithelium, where it supports increased metabolism, proliferation, and tumor‐associated transcriptional programs.
Jørgen D. Rønneberg +14 more
wiley +1 more source
panX: pan-genome analysis and exploration [PDF]
Nucleic Acids Research, 2016 Horizontal transfer, gene loss, and duplication result in dynamic bacterial genomes shaped by a complex mixture of different modes of evolution. Closely related strains can differ in the presence or absence of many genes, and the total number of distinct genes found in a set of related isolates – the pan-genome – is often many times ...
Ding, Wei +2 more
openaire +5 more sources
, 2018 Klebsiella pneumoniae pan-genome analysis files and Python script.These data are described in Wyres et al "Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae."
KELLY WYRES (1122371)
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Pan-genome analysis of Seep-SRB2 metagenomes.
, 2023 Nineteen genomes from eight Seep-SRB1a species were analyzed using the Anvi’o pan-genome analysis pipeline [45]. Three gene cluster bins were annotated based on genes that were identified as part of the core metagenome, present in Seep-SRB2 sp.
Danielle Goudeau (8455311) +13 more
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Structure‐forward targeting of claudins with synthetic binders
FEBS Letters, EarlyView.Claudins form the paracellular barriers between epithelial and endothelial tissues at tight junctions and are targets for molecular binders with the goal of modulating barrier permeability. Claudin‐binding molecules are relevant in drug delivery or in altering claudin interactions with disease‐causing proteins.
Alex J. Vecchio
wiley +1 more source
Towards comparative pan-genomics
, 2020 Comparative genomics investigates the genomic makeup of species to unravel their unique variations and evolutionary relationships. High-throughput sequencing technologies have enabled reading the DNA content of a wide variety of species at an unprecedented rate.
openaire +2 more sources
Pan-genome development of C. bovis.
, 2018 Pan-genome development using permutations of all 21 isolates of C. bovis (left); the pan-genome development of the C. bovis isolates obtained from humans and cows (upper right); and, the pan-genome development of the C.
Aaron Villarma (5537420) +8 more
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