Tracking Seasonal Influenza Trends in South Tyrol During 2022/2023 Using Genomic Surveillance Data
Influenza and Other Respiratory Viruses, Volume 19, Issue 4, April 2025.ABSTRACT Background Influenza seasons are characterized by a complex interplay of co‐circulating strains with high spatial and temporal heterogeneities. Surveillance is crucial for monitoring the spread and evolution of the virus and design effective public health response strategies.
Irene Bianconi +6 more
wiley +1 more source
Viral evolution from one generation of human influenza infection to the next [PDF]
, 2013 published_or_final_versio
Chan, KH +4 more
core
Phylodynamic and Epistatic Analysis of Coxsackievirus A24 and Its Variant
VirusesCoxsackievirus A24 (CV-A24) is a human enterovirus that causes acute flaccid paralysis. However, a Coxsackievirus A24 variant (CV-A24v) is the most common cause of eye infections.
Chia-Chi Cheng +5 more
doaj +1 more source
Yule-generated trees constrained by node imbalance
, 2013 The Yule process generates a class of binary trees which is fundamental to population genetic models and other applications in evolutionary biology.
Disanto, Filippo +2 more
core +1 more source
Time reversal dualities for some random forests
, 2014 We consider a random forest $\mathcal{F}^*$, defined as a sequence of i.i.d. birth-death (BD) trees, each started at time 0 from a single ancestor, stopped at the first tree having survived up to a fixed time $T$.
Felipe, Miraine Dávila, Lambert, Amaury
core
Phylogenetic patterns recover known HIV epidemiological relationships and reveal common transmission of multiple variants. [PDF]
, 2018 The growth of human immunodeficiency virus (HIV) sequence databases resulting from drug resistance testing has motivated efforts using phylogenetic methods to assess how HIV spreads1-4.
Leitner, Thomas, Romero-Severson, Ethan
core +1 more source
Overrepresentation of Injection Drug Use Route of Infection Among Human Immunodeficiency Virus Long-term Nonprogressors: A Nationwide, Retrospective Cohort Study in China, 1989-2016. [PDF]
, 2019 BackgroundWhy some persons living with human immunodeficiency virus (HIV) (PLWH) progress quickly and others remain "healthy" for a decade or more without treatment remains a fundamental question of HIV pathology.
Brookmeyer, Ron +11 more
core
Journal of Dairy Science: Bovine leukemia virus (BLV) is a highly prevalent retrovirus in US dairy cattle herds and has negatively affected dairy herds by reducing milk production, increasing culling rates, and contributing to economic losses. The objective of this study was to
B.M. Nyokabi +8 more
doaj +1 more source
The Global Evolutionary History of Orf Virus in Sheep and Goats Revealed by Whole Genomes Data
VirusesOrf virus (ORFV) belongs to the genus Parapoxvirus (Poxviridae family). It is the causative agent of contagious ecthyma (CE) that is an economically detrimental disease affecting small ruminants globally. Contagious ecthyma outbreaks are usually reported
Elisabetta Coradduzza +17 more
doaj +1 more source
Frontiers in MicrobiologyIntroductionImmunosuppressive diseases, such as chicken infectious anemia virus (CIAV), pose a major threat to livestock farming due to reduced disease resistance, poor vaccine response, and overall poor productivity.
Giovanni Franzo +6 more
doaj +1 more source