Results 41 to 50 of about 2,963 (216)

The phylodynamics of hepatitis C virus in a clinical and public health context [PDF]

open access: yes, 2018
Hepatitis C virus (HCV) is a blood-borne RNA virus that infects the liver of its human host. Worldwide an estimated 80 million people suffer from viraemic HCV infections resulting in more than half a million deaths annually.
Ho, K.Y.C.
core   +4 more sources

Phylogenetic and Phylodynamic Analysis of Delta Strains Circulating in Italy

open access: yesViruses, 2023
The hepatitis delta virus (HDV) exhibits high genetic and evolutionary variability and is classified into eight genotypes (HDV-1 to -8). HDV-1 is the most widespread genotype worldwide and includes several subtypes.
Leonidas Salichos   +8 more
doaj   +1 more source

Phylodynamic Inference across Epidemic Scales [PDF]

open access: yesMolecular Biology and Evolution, 2017
Within-host genetic diversity and large transmission bottlenecks confound phylodynamic inference of epidemiological dynamics. Conventional phylodynamic approaches assume that nodes in a time-scaled pathogen phylogeny correspond closely to the time of transmission between hosts that are ancestral to the sample.
Volz, E, Romero-Severson, E, Leitner, TK
openaire   +3 more sources

Reconstructing the Temporal Origin and the Transmission Dynamics of the HIV Subtype B Epidemic in St. Petersburg, Russia

open access: yesViruses, 2022
The HIV/AIDS epidemic in Russia is among the fastest growing in the world. HIV epidemic burden is non-uniform in different Russian regions and diverse key populations.
Marina Siljic   +11 more
doaj   +1 more source

Diverse Large HIV-1 Non-subtype B Clusters Are Spreading Among Men Who Have Sex With Men in Spain

open access: yesFrontiers in Microbiology, 2019
In Western Europe, the HIV-1 epidemic among men who have sex with men (MSM) is dominated by subtype B. However, recently, other genetic forms have been reported to circulate in this population, as evidenced by their grouping in clusters predominantly ...
Elena Delgado   +91 more
doaj   +1 more source

Image_3_Exploring the Evolutionary History and Phylodynamics of Human Immunodeficiency Virus Type 1 Outbreak From Unnao, India Using Phylogenetic Approach.JPEG

open access: yes, 2022
Certain rural and semiurban settings in the Unnao district, Uttar Pradesh, India observed an unprecedented increase in the detection of HIV cases during July 2017.
Samiran Panda (3595097)   +5 more
core   +1 more source

Molecular Epidemiology of HIV-1 Subtype B Infection across Florida Reveals Few Large Superclusters with Metropolitan Origin

open access: yesMicrobiology Spectrum, 2022
Florida is considered an epicenter of HIV in the United States. The U.S. federal plan for Ending the HIV Epidemic (EHE) within 10 years prioritizes seven of Florida’s 67 counties for intervention. We applied molecular epidemiology methods to characterize
Shannan N. Rich   +7 more
doaj   +1 more source

Image_4_Exploring the Evolutionary History and Phylodynamics of Human Immunodeficiency Virus Type 1 Outbreak From Unnao, India Using Phylogenetic Approach.JPEG

open access: yes, 2022
Certain rural and semiurban settings in the Unnao district, Uttar Pradesh, India observed an unprecedented increase in the detection of HIV cases during July 2017.
Samiran Panda (3595097)   +5 more
core   +1 more source

Early phylodynamics analysis of the COVID-19 epidemic in France [PDF]

open access: yes, 2021
International audienceFrance was one of the first countries to be reached by the COVID-19 pandemic. Here, we analyse 196 SARS-Cov-2 genomes collected between Jan 24 and Mar 24 2020, and perform a phylodynamics analysis.
Thibault, Vincent   +37 more
core   +1 more source

Phylodynamic Inference for Structured Epidemiological Models

open access: yesPLoS Computational Biology, 2014
Coalescent theory is routinely used to estimate past population dynamics and demographic parameters from genealogies. While early work in coalescent theory only considered simple demographic models, advances in theory have allowed for increasingly complex demographic scenarios to be considered.
David A. Rasmussen   +2 more
openaire   +4 more sources

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