Results 21 to 30 of about 4,475 (152)

Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data

Viruses, 2022
Since their introduction in 1859, European rabbits (Oryctolagus cuniculus) have had a devastating impact on agricultural production and biodiversity in Australia, with competition and land degradation by rabbits being one of the key threats to ...
Carlo Pacioni, Robyn N. Hall, Tanja Strive, David S. L. Ramsey, Mandev S. Gill, Timothy G. Vaughan   +5 more
doaj   +1 more source

Canalization of the evolutionary trajectory of the human influenza virus [PDF]

, 2011
Since its emergence in 1968, influenza A (H3N2) has evolved extensively in genotype and antigenic phenotype. Antigenic evolution occurs in the context of a two-dimensional 'antigenic map', while genetic evolution shows a characteristic ladder-like ...
A Kucharski, A Monto, A Park, A Rambaut, Andrew Rambaut, B Adams, B Finkelman, C Viboud, CA Russell, D Weinreich, DJ Smith, E Goldstein, E O'Dea, E Volz, F Carrat, F Tria, G Chowell, G Hirst, IG Barr, J Gog, J Lin, J O'Brien, J Truscott, J Voeten, K Koelle, K Koelle, K Koelle, K Koelle, M Recker, Mercedes Pascual, MI Nelson, NM Ferguson, R Bush, S Bhatt, S Gould, S Kryazhimskiy, S Park, T Bedford, T Bedford, Trevor Bedford, V Gupta, WM Fitch, YI Wolf, Z Yang   +43 more
core   +5 more sources

Viral phylodynamics.

PLoS Computational Biology, 2013
Viral phylodynamics is defined as the study of how epidemiological, immunological, and evolutionary processes act and potentially interact to shape viralphylogenies.
Erik M Volz, Katia Koelle, Trevor Bedford   +2 more
doaj   +1 more source

MERS-CoV spillover at the camel-human interface

eLife, 2018
Middle East respiratory syndrome coronavirus (MERS-CoV) is a zoonotic virus from camels causing significant mortality and morbidity in humans in the Arabian Peninsula.
Gytis Dudas, Luiz Max Carvalho, Andrew Rambaut, Trevor Bedford   +3 more
doaj   +1 more source

Molecular Epidemiology of Rotavirus A in Calves: Evolutionary Analysis of a Bovine G8P[11] Strain and Spatio-Temporal Dynamics of G6 Lineages in the Americas

Viruses, 2023
Rotavirus A (RVA) causes diarrhea in calves and frequently possesses the G6 and P[5]/P[11] genotypes, whereas G8 is less common. We aimed to compare RVA infections and G/P genotypes in beef and dairy calves from major livestock regions of Argentina ...
Enrique L. Louge Uriarte, Alejandra Badaracco, Maximiliano J. Spetter, Samuel Miño, Joaquín I. Armendano, Mark Zeller, Elisabeth Heylen, Ernesto Späth, María Rosa Leunda, Ana Rita Moreira, Jelle Matthijnssens, Viviana Parreño, Anselmo C. Odeón   +12 more
doaj   +1 more source

Identification of CRF66_BF, a New HIV-1 Circulating Recombinant Form of South American Origin

Frontiers in Microbiology, 2021
Circulating recombinant forms (CRFs) are important components of the HIV-1 pandemic. Among 110 reported in the literature, 17 are BF1 intersubtype recombinant, most of which are of South American origin. Among these, all 5 identified in the Southern Cone
Joan Bacqué, Elena Delgado, Sonia Benito, María Moreno-Lorenzo, Vanessa Montero, Horacio Gil, Mónica Sánchez, María Carmen Nieto-Toboso, Josefa Muñoz, Miren Z. Zubero-Sulibarria, Estíbaliz Ugalde, Elena García-Bodas, Javier E. Cañada, Jorge del Romero, Carmen Rodríguez, Iciar Rodríguez-Avial, Luis Elorduy-Otazua, José J. Portu, Juan García-Costa, Antonio Ocampo, Jorge J. Cabrera, Michael M. Thomson   +21 more
doaj   +1 more source

Elucidating the phylodynamics of endemic rabies virus in eastern Africa using whole-genome sequencing [PDF]

, 2015
Many of the pathogens perceived to pose the greatest risk to humans are viral zoonoses, responsible for a range of emerging and endemic infectious diseases.
Biek, Roman, Brunker, Kirstyn, Cleaveland, Sarah, Fooks, AR, Hampson, Katie, Horton, Daniel L, Kazwala, Rudovick, Lembo, Tiziana, Marston, Denise A, Mtema, Zacharia J, Ngeleja, Chanasa, Sambo, Maganga, Sikana, Lwitiko, Wilkie, Gavin   +13 more
core   +1 more source

Phylodynamics of H5N1 Highly Pathogenic Avian Influenza in Europe, 2005-2010: Potential for Molecular Surveillance of New Outbreaks. [PDF]

, 2015
Previous Bayesian phylogeographic studies of H5N1 highly pathogenic avian influenza viruses (HPAIVs) explored the origin and spread of the epidemic from China into Russia, indicating that HPAIV circulated in Russia prior to its detection there in 2005 ...
Alkhamis, Mohammad A, Moore, Brian R, Perez, Andres M   +2 more
core   +2 more sources

Phylogenetic and Phylodynamic Analysis of Delta Strains Circulating in Italy

Viruses, 2023
The hepatitis delta virus (HDV) exhibits high genetic and evolutionary variability and is classified into eight genotypes (HDV-1 to -8). HDV-1 is the most widespread genotype worldwide and includes several subtypes.
Leonidas Salichos, Claudia Minosse, Ubaldo Visco-Comandini, Chiara Taibi, Verdiana Zulian, Gianpiero D’Offizi, Nayan Pallothu, Fiona McPhee, Anna Rosa Garbuglia   +8 more
doaj   +1 more source

Reconstructing the Temporal Origin and the Transmission Dynamics of the HIV Subtype B Epidemic in St. Petersburg, Russia

Viruses, 2022
The HIV/AIDS epidemic in Russia is among the fastest growing in the world. HIV epidemic burden is non-uniform in different Russian regions and diverse key populations.
Marina Siljic, Valentina Cirkovic, Luka Jovanovic, Anastasiia Antonova, Aleksey Lebedev, Ekaterina Ozhmegova, Anna Kuznetsova, Tatiyana Vinogradova, Aleksei Ermakov, Nikita Monakhov, Marina Bobkova, Maja Stanojevic   +11 more
doaj   +1 more source