Results 21 to 30 of about 465,608 (240)

Unrealistic phylogenetic trees may improve phylogenetic footprinting [PDF]

Bioinformatics, 2017
Abstract Motivation The computational investigation of DNA binding motifs from binding sites is one of the classic tasks in bioinformatics and a prerequisite for understanding gene regulation as a whole.
Nettling, Martin, Treutler, Hendrik, Cerquides, Jesús, Grosse, Ivo   +3 more
openaire   +3 more sources

Comparative analysis of chloroplast genomes of 29 tomato germplasms: genome structures, phylogenetic relationships, and adaptive evolution

Frontiers in Plant Science, 2023
In order to compare and analyze the chloroplast (cp) genomes of tomato germplasms and understand their phylogenetic relationships, the cp genomes of 29 tomato germplasms were sequenced and analyzed in this study.
Xiaomin Wang, Xiaomin Wang, Xiaomin Wang, Shengyi Bai, Zhaolei Zhang, Fushun Zheng, Lina Song, Lu Wen, Meng Guo, Meng Guo, Meng Guo, Guoxin Cheng, Guoxin Cheng, Guoxin Cheng, Wenkong Yao, Wenkong Yao, Wenkong Yao, Yanming Gao, Yanming Gao, Yanming Gao, Jianshe Li, Jianshe Li, Jianshe Li   +22 more
doaj   +1 more source

Genetic diversity of Leptospira interrogans circulating isolates and vaccine strains in China from 1954–2014

Human Vaccines & Immunotherapeutics, 2019
Leptospirosis is one of the most important but neglected, infectious tropical diseases worldwide. Leptospira interrogans is now recognized as a leading cause of the disease.
Cuicai Zhang, Zhe Li, Yinghua Xu, Ying Zhang, Shijun Li, Jinlong Zhang, Shenghui Cui, Zongli Du, Xiaofang Xin, Yung-Fu Chang, Xiugao Jiang, Qiang Ye   +11 more
doaj   +1 more source

Molecular Phylogeny Reconstruction of Grouper (Serranidae: Epinephelinae) at Northern Part of Bird’s Head Seascape - Papua Inferred from COI Gene

Fisheries and Aquatic Sciences, 2021
Grouper is one of the most economically important fishes with various morphological forms and characteristics, meaning it is often difficult to identify species and distinguish between life stages, sometimes ...
Ricardo F. Tapilatu, Tresia Sonya Tururaja, Sipriyadi, Aradea Bujana Kusuma   +3 more
doaj   +1 more source

Phylogeography of the Plateau Pika (Ochotona curzoniae) in Response to the Uplift of the Qinghai-Tibet Plateau

Diversity, 2023
The evolution and current distribution of species on the Qinghai-Tibet Plateau have been significantly impacted by historical occurrences, including the uplift of the plateau and the Quaternary climate upheaval.
Yinglian Qi, Xiaoyan Pu, Zhilian Li, Daoguang Song, Zhi Chen   +4 more
doaj   +1 more source

The Mitochondrial Genome of the Phytopathogenic Fungus Bipolaris sorokiniana and the Utility of Mitochondrial Genome to Infer Phylogeny of Dothideomycetes

Frontiers in Microbiology, 2020
A number of species in Bipolaris are important plant pathogens. Due to a limited number of synapomorphic characters, it is difficult to perform species identification and to estimate phylogeny of Bipolaris based solely on morphology.
Nan Song, Yuehua Geng, Xinghao Li
doaj   +1 more source

Virome of high-altitude canine digestive tract and genetic characterization of novel viruses potentially threatening human health

mSphere, 2023
The majority of currently emerging infectious illnesses are zoonotic infections, which have caused serious public health and economic implications. The development of viral metagenomics has helped us to explore unknown viruses.
Xiaojie Jiang, Jia Liu, Yuan Xi, Qing Zhang, Yongshun Wang, Min Zhao, Xiang Lu, Haisheng Wu, Tongling Shan, Bin Ni, Wen Zhang, Xiao Ma   +11 more
doaj   +1 more source

Presence and diversity of Leishmania RNA virus in an old zoonotic cutaneous leishmaniasis focus, northeastern Iran: haplotype and phylogenetic based approach

International Journal of Infectious Diseases, 2020
Objective: Leishmania RNA virus (LRV) is a double-stranded RNA (dsRNA) virus that circulates within many species of the Leishmania parasite. In this study, we aimed to investigate the presence of LRV2 circulating in Leishmania isolates in an old focus of
Reza Saberi, Mahdi Fakhar, Homa Hajjaran, Angila Ataei-Pirkooh, Mehdi Mohebali, Niloofar Taghipour, Hajar Ziaei Hezarjaribi, Yousef Moghadam, Abouzar Bagheri   +8 more
doaj   +1 more source

Improved Understanding of the Macrofungal Diversity of Mongolia: Species Richness, Conservation Status, and An Annotated Checklist

Mycobiology
In this study, we updated and revised the checklist of macrofungi, along with the distribution of phytogeographical regions and the regional conservation status in Mongolia.
Nyamsuren Kherlenchimeg, Ganbaatar Burenbaatar, Shukherdorj Baasanmunkh, Zagarjav Tsegmed, Magsar Urgamal, Tolgor Bau, Sang-Kuk Han, Seung-Yoon Oh, Hyeok Jae Choi   +8 more
doaj   +1 more source

Phylogenetic Comparative Methods on Phylogenetic Networks with Reticulations [PDF]

Systematic Biology, 2017
Abstract The goal of phylogenetic comparative methods (PCMs) is to study the distribution of quantitative traits among related species. The observed traits are often seen as the result of a Brownian Motion (BM) along the branches of a phylogenetic tree.
Bastide, Paul, Solís-Lemus, Claudia, Kriebel, Ricardo, Sparks, K. William, Ané, Cécile   +4 more
openaire   +3 more sources