Results 21 to 30 of about 1,161,913 (308)
DNA Barcoding of Cardinalfish (Apogonidae) in Gilimanuk Bay, Bali, Indonesia
Jurnal Ilmiah Perikanan dan Kelautan, 2023 The Apogonidae is estimated to consist of nearly 300 fish species, most of which inhabit coral reef areas. The lack of distinctive body markings and overlapping species distribution makes species assignment challenging.
I Nyoman Giri Putra Putra +2 more
doaj +1 more source
Uprooted Phylogenetic Networks [PDF]
Bulletin of Mathematical Biology, 2017 The need for structures capable of accommodating complex evolutionary signals such as those found in, for example, wheat has fueled research into phylogenetic networks. Such structures generalize the standard model of a phylogenetic tree by also allowing for cycles and have been introduced in rooted and unrooted form.
Gambette, Philippe +2 more
openaire +6 more sources
A new species of Charinus Simon 1892 from Brazil, with notes on behavior (Amblypygi, Charinidae)
ZooKeys, 2016 A new species of Charinus is described and illustrated from the Brazilian Atlantic Forest. Charinus ruschii sp. n. is found in Santa Lúcia reserve, Espírito Santo state, and is sympatric with C. brasilianus and C. montanus.
Gustavo Miranda +4 more
doaj +3 more sources
Phylogenetic comparative assembly [PDF]
Algorithms for Molecular Biology, 2009 Recent high throughput sequencing technologies are capable of generating a huge amount of data for bacterial genome sequencing projects. Although current sequence assemblers successfully merge the overlapping reads, often several contigs remain which cannot be assembled any further.
Husemann, Peter, Stoye, Jens
openaire +5 more sources
Unrealistic phylogenetic trees may improve phylogenetic footprinting [PDF]
Bioinformatics, 2017 Abstract Motivation The computational investigation of DNA binding motifs from binding sites is one of the classic tasks in bioinformatics and a prerequisite for understanding gene regulation as a whole.
Nettling, Martin +3 more
openaire +3 more sources
Visualizing Co-Phylogenetic Reconciliations [PDF]
, 2017 We introduce a hybrid metaphor for the visualization of the reconciliations of co-phylogenetic trees, that are mappings among the nodes of two trees. The typical application is the visualization of the co-evolution of hosts and parasites in biology.
Calamoneri, Tiziana +3 more
core +2 more sources
Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations [PDF]
, 2015 Phylogenetic networks are a generalization of evolutionary or phylogenetic trees that are used to represent the evolution of species which have undergone reticulate evolution.
Huber, Katharina T. +3 more
core +1 more source
DNA identification of kayu kuning (yellow-fruited moonseed) from East Kalimantan, Indonesia [PDF]
Pharmaciana, 2022 Kalimantan is an island with an abundance of kayu Kuning (yellow-fruited moonseed). Kayu kuning is used for three different plant species, namely Arcangelisia flava (L.) Merr., Fibraurea tinctoria Lour., and Coscinium fenestratum (Gaertn.) Colebr ...
Riski Sulistiarini
doaj +1 more source
Systematic identification of gene families for use as markers for phylogenetic and phylogeny- driven ecological studies of bacteria and archaea and their major subgroups [PDF]
, 2013 With the astonishing rate that the genomic and metagenomic sequence data sets are accumulating, there are many reasons to constrain the data analyses.
Eisen, Jonathan A. +2 more
core +4 more sources
Mitochondrial DNA. Part B. Resources, 2022 Paphiopedilum gratrixianum is a critically endangered orchid with extremely small populations and of great horticulture value. We assembled and annotated the complete chloroplast genome of P. gratrixianum in this study. The genome is 157,292 bp in length
Chao Hu +3 more
doaj +1 more source