Results 11 to 20 of about 149,860 (254)
Ecology and Evolution, 2022 Community phylogenetic analysis is an effective approach to understanding the process of community formation. The phylogenetic tree of the species pool is reconstructed in the first step, and the phylogenetic tree obtained in the second step is used to ...
Seiya Okuno +9 more
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ENJ algorithm can construct triple phylogenetic trees
Molecular Therapy: Nucleic Acids, 2021 Phylogenetic analysis is used to analyze the evolution of species according to the characteristics of biological sequences. The analytical results are generally represented by phylogenetic trees.
Yan Hong, Maozu Guo, Juan Wang
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Phylogenetic trees: Grammar versus vocabulary
Russian Journal of Linguistics, 2022 Traditionally, genealogical relationships between languages are established on the basis of phonetic and lexical data. The question whether genealogical relationships among languages can be defined based on grammatical data remains unanswered.
Vladimir N. Polyakov +2 more
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TreeViewer: Flexible, modular software to visualise and manipulate phylogenetic trees [PDF]
Ecology and EvolutionGiorgio Bianchini
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Matchings and phylogenetic trees [PDF]
Proceedings of the National Academy of Sciences, 1998 This paper presents a natural coordinate system for phylogenetic trees using a correspondence with the set of perfect matchings in the complete graph. This correspondence produces a distance between phylogenetic trees, and a way of enumerating all trees in a minimal step order. It is useful in randomized algorithms because it enables moves on the space
Diaconis, Persi W., Holmes, Susan P.
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Species divergence and phylogenetic variation of ecophysiological traits in lianas and trees. [PDF]
PLoS ONE, 2014 The climbing habit is an evolutionary key innovation in plants because it is associated with enhanced clade diversification. We tested whether patterns of species divergence and variation of three ecophysiological traits that are fundamental for plant ...
Rodrigo S Rios +2 more
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Drawing Phylogenetic Trees [PDF]
, 2005 We present linear-time algorithms for drawing phylogenetic trees in radial and circular representations. In radial drawings given edge lengths (representing evolutionary distances) are preserved, but labels (names of taxons represented in the leaves) need to be adjusted, whereas in circular drawings labels are perfectly spread out, but edge lengths ...
Christian Bachmaier +2 more
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The Shapley value of phylogenetic trees [PDF]
Journal of Mathematical Biology, 2007 References added, and a section (calculating the Shapley value of a tree game from its subtrees) was removed for length reasons (request of referee) and may appear in another paper. 16 pages; related work at http://www.math.hmc.edu/~su/papers.html. Journal of Mathematical Biology, to appear.
Haake, Claus-Jochen +2 more
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Spectral cluster supertree: fast and statistically robust merging of rooted phylogenetic trees [PDF]
Frontiers in Molecular BiosciencesGavin Huttley +2 more
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Characterization of a Branch of the Phylogenetic Tree [PDF]
Journal of Theoretical Biology, 2003 We use a combination of analytic models and computer simulations to gain insight into the dynamics of evolution. Our results suggest that certain interesting phenomena should eventually emerge from the fossil record. For example, there should be a ``tortoise and hare effect'': Those genera with the smallest species death rate are likely to survive much
Samuel, Stuart A., Weng, Gezhi
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