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Population genetics in microchannels
Proceedings of the National Academy of Sciences, 2022 Significance Many microbial populations proliferate in small channels. In such environments, reproducing cells organize in parallel lanes. Reproducing cells shift these lanes, potentially expelling other cells from the channel. In this paper, we combine theory and experiments to understand how these dynamics affects the diversity
Anzhelika Koldaeva +3 more
openaire +3 more sources
Arlequin (version 3.0): An integrated software package for population genetics data analysis
Evolutionary bioinformatics online, 2005 Arlequin ver 3.0 is a software package integrating several basic and advanced methods for population genetics data analysis, like the computation of standard genetic diversity indices, the estimation of allele and haplotype frequencies, tests of ...
L. Excoffier +2 more
semanticscholar +1 more source
Population Genetics of Rare Variants and Complex Diseases [PDF]
, 2012 Identifying drivers of complex traits from the noisy signals of genetic variation obtained from high throughput genome sequencing technologies is a central challenge faced by human geneticists today.
Hernandez, Ryan D. +3 more
core +2 more sources
The wild tomato species Solanum chilense shows variation in pathogen resistance between geographically distinct populations [PDF]
PeerJ, 2017 Wild tomatoes are a valuable source of disease resistance germplasm for tomato (Solanum lycopersicum) breeders. Many species are known to possess a certain degree of resistance against certain pathogens; however, evolution of resistance traits is yet ...
Remco Stam +2 more
doaj +2 more sources
Ancestral population genomics [PDF]
, 2012 The full genomes of several closely related species are now available, opening an emerging field of investigation borrowing both from population genetics and phylogenetics.
Dutheil, J., Hobolth, A.
core +2 more sources
Ecology and Evolution, 2019 Effective conservation and management of pond‐breeding amphibians depends on the accurate estimation of population structure, demographic parameters, and the influence of landscape features on breeding‐site connectivity.
Kyle A. O'Connell +4 more
doaj +1 more source
Variable number of tandem repeat markers in the genome sequence of Mycosphaerella fijiensis, the causal agent of black leaf streak disease of banana (Musa spp) [PDF]
, 2010 . We searched the genome of Mycosphaerella fijiensis for molecular markers that would allow population genetics analysis of this plant pathogen. M. fijiensis, the causal agent of banana leaf streak disease, also known as black Sigatoka, is the most ...
Ferreira, C.F. +8 more
core +4 more sources
A Primer of Population Genetics and Genomics
, 2020 A Primer of Population Genetics and Genomics, 4th edition, has been completely revised and updated to provide a concise but comprehensive introduction to the basic concepts of population genetics and genomics.
D. Hartl
semanticscholar +1 more source
Landscape of multi-nucleotide variants in 125,748 human exomes and 15,708 genomes
Nature Communications, 2020 Multi-nucleotide variants (MNV) are genetic variants in close proximity of each other on the same haplotype whose functional impact is difficult to predict if they reside in the same codon. Here, Wang et al. use the gnomAD dataset to assemble a catalogue
Qingbo Wang +11 more
doaj +1 more source
Neutral genomic signatures of host-parasite coevolution
BMC Evolutionary Biology, 2019 Background Coevolution is a selective process of reciprocal adaptation in hosts and parasites or in mutualistic symbionts. Classic population genetics theory predicts the signatures of selection at the interacting loci of both species, but not the ...
Daniel živković +4 more
doaj +1 more source