Results 11 to 20 of about 14,416 (178)

Genomic identification and characterization of prophages associated with Citrobacter freundii strains

open access: yesJournal of Advanced Biotechnology and Experimental Therapeutics, 2023
Citrobacter freundii is a Gram-negative opportunistic bacterium that can cause infections, sepsis, and meningitis, predominantly in infants and immunocompromised adults. This study is aimed at investigating the distribution of prophages in C.
Ishrat Jabeen   +6 more
doaj   +1 more source

Comparative analysis of prophage-like elements in Helicobacter sp. genomes [PDF]

open access: yesPeerJ, 2016
Prophages are regarded as one of the factors underlying bacterial virulence, genomic diversification, and fitness, and are ubiquitous in bacterial genomes. Information on Helicobacter sp. prophages remains scarce.
Xiangyu Fan   +4 more
doaj   +2 more sources

Prophage Genomics [PDF]

open access: yesMicrobiology and Molecular Biology Reviews, 2003
SUMMARY The majority of the bacterial genome sequences deposited in the National Center for Biotechnology Information database contain prophage sequences. Analysis of the prophages suggested that after being integrated into bacterial genomes, they undergo a complex decay process consisting of inactivating point mutations ...
Carlos, Canchaya   +4 more
openaire   +3 more sources

Diversity of Pseudomonas aeruginosa Temperate Phages

open access: yesmSphere, 2022
Modern sequencing technologies have provided insight into the genetic diversity of numerous species, including the human pathogen Pseudomonas aeruginosa.
Genevieve Johnson   +2 more
doaj   +1 more source

In Silico Characterisation of Putative Prophages in Lactobacillaceae Used in Probiotics for Vaginal Health

open access: yesMicroorganisms, 2022
While live biotherapeutics offer a promising approach to optimizing vaginal microbiota, the presence of functional prophages within introduced Lactobacillaceae strains could impact their safety and efficacy.
Anna-Ursula Happel   +7 more
doaj   +1 more source

Comprehensive deciphering prophages in genus Acetobacter on the ecology, genomic features, toxin–antitoxin system, and linkage with CRISPR-Cas system

open access: yesFrontiers in Microbiology, 2022
Acetobacter is the predominant microbe in vinegar production, particularly in those natural fermentations that are achieved by complex microbial communities.
Chenggong Qian   +4 more
doaj   +1 more source

Prophage Hunter: an integrative hunting tool for active prophages [PDF]

open access: yesNucleic Acids Research, 2019
Abstract Identifying active prophages is critical for studying coevolution of phage and bacteria, investigating phage physiology and biochemistry, and engineering designer phages for diverse applications. We present Prophage Hunter, a tool aimed at hunting for active prophages from whole genome assembly of bacteria.
Wenchen Song   +14 more
openaire   +2 more sources

Prophage Genomics and Ecology in the Family Rhodobacteraceae

open access: yesMicroorganisms, 2021
Roseobacters are globally abundant bacteria with critical roles in carbon and sulfur biogeochemical cycling. Here, we identified 173 new putative prophages in 79 genomes of Rhodobacteraceae.
Kathryn Forcone   +3 more
doaj   +1 more source

Prophage identification and molecular analysis in the genomes of Pseudomonas aeruginosa strains isolated from critical care patients

open access: yesmSphere, 2023
Prophages are bacteriophages integrated into the bacterial host’s chromosome. This research aims to analyze and characterize the existing prophages within a collection of 53 Pseudomonas aeruginosa strains from intensive care units (ICUs) in Portugal and ...
Manuel González de Aledo   +8 more
doaj   +1 more source

The Promise and Pitfalls of Prophages

open access: yes, 2023
Abstract Phages dominate every ecosystem on the planet. While virulent phages sculpt the microbiome by killing their bacterial hosts, temperate phages provide unique growth advantages to their hosts through lysogenic conversion. Many prophages benefit their host, and prophages are responsible for genotypic and phenotypic differences ...
Jody C. McKerral   +8 more
openaire   +2 more sources

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