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Citrobacter freundii is a Gram-negative opportunistic bacterium that can cause infections, sepsis, and meningitis, predominantly in infants and immunocompromised adults. This study is aimed at investigating the distribution of prophages in C.
Ishrat Jabeen +6 more
doaj +1 more source
Characterization of prophages in bacterial genomes from the honey bee (Apis mellifera) gut microbiome [PDF]
The gut of the European honey bee (Apis mellifera) possesses a relatively simple bacterial community, but little is known about its community of prophages (temperate bacteriophages integrated into the bacterial genome).
Emma K. Bueren +5 more
doaj +2 more sources
Comparative analysis of prophage-like elements in Helicobacter sp. genomes [PDF]
Prophages are regarded as one of the factors underlying bacterial virulence, genomic diversification, and fitness, and are ubiquitous in bacterial genomes. Information on Helicobacter sp. prophages remains scarce.
Xiangyu Fan +4 more
doaj +2 more sources
SUMMARY The majority of the bacterial genome sequences deposited in the National Center for Biotechnology Information database contain prophage sequences. Analysis of the prophages suggested that after being integrated into bacterial genomes, they undergo a complex decay process consisting of inactivating point mutations ...
Carlos, Canchaya +4 more
openaire +3 more sources
Diversity of Pseudomonas aeruginosa Temperate Phages
Modern sequencing technologies have provided insight into the genetic diversity of numerous species, including the human pathogen Pseudomonas aeruginosa.
Genevieve Johnson +2 more
doaj +1 more source
Acetobacter is the predominant microbe in vinegar production, particularly in those natural fermentations that are achieved by complex microbial communities.
Chenggong Qian +4 more
doaj +1 more source
Prophage Hunter: an integrative hunting tool for active prophages [PDF]
Abstract Identifying active prophages is critical for studying coevolution of phage and bacteria, investigating phage physiology and biochemistry, and engineering designer phages for diverse applications. We present Prophage Hunter, a tool aimed at hunting for active prophages from whole genome assembly of bacteria.
Wenchen Song +14 more
openaire +2 more sources
Prophages are bacteriophages integrated into the bacterial host’s chromosome. This research aims to analyze and characterize the existing prophages within a collection of 53 Pseudomonas aeruginosa strains from intensive care units (ICUs) in Portugal and ...
Manuel González de Aledo +8 more
doaj +1 more source
Prophage Genomics and Ecology in the Family Rhodobacteraceae
Roseobacters are globally abundant bacteria with critical roles in carbon and sulfur biogeochemical cycling. Here, we identified 173 new putative prophages in 79 genomes of Rhodobacteraceae.
Kathryn Forcone +3 more
doaj +1 more source
Bacteriophages are major genetic factors promoting horizontal gene transfer (HGT) between bacteria. Their roles in dynamic bacterial genome evolution have been increasingly highlighted by the fact that many sequenced bacterial genomes contain multiple prophages carrying a wide range of genes. Enterohemorrhagic Escherichia coli O157 is the most striking
Md Asadulghani +7 more
openalex +5 more sources

