Results 31 to 40 of about 3,930,063 (310)

Conformational kinetics reveals affinities of protein conformational states [PDF]

open access: yesProceedings of the National Academy of Sciences, 2015
Significance Despite 50 years of studies of coupled binding and conformational change reactions in proteins and nucleic acids, there has been no detailed analysis of the affinities of the multiple conformational states involved. The relationship between these affinities and the dynamics of conformational change has also been largely ...
Daniels, Kyle G   +2 more
openaire   +2 more sources

Molecular dynamics as an approach to study prion protein misfolding and the effect of pathogenic mutations [PDF]

open access: yes, 2011
Computer simulation of protein dynamics offers unique high-resolution information that complements experiment. Using experimentally derived structures of the natively folded prion protein (PrP), physically realistic dynamics and conformational changes ...
Valerie Daggett   +3 more
core   +1 more source

Infrared spectroscopy analysis determining secondary structure change in albumin by cerium oxide nanoparticles

open access: yesFrontiers in Toxicology, 2023
Cerium oxide (CeO2) nanoparticles are expected to have applications in the biomedical field because of their antioxidative properties. Inorganic nanoparticles interact with proteins at the nanoparticle surface and change their conformation when ...
Masakazu Umezawa   +4 more
doaj   +1 more source

Coupling of a Microfluidic Mixer to a Fourier-transform Infrared Spectrometer for Protein-Conformation Studies

open access: yesCHIMIA, 2011
The biological properties of a protein critically depend on its conformation, which can vary as a result of changes in conditions such as pH or following the addition of various substances.
Denis Prim   +2 more
doaj   +1 more source

Sequence-Dependent Correlated Segments in the Intrinsically Disordered Region of ChiZ

open access: yesBiomolecules, 2020
How sequences of intrinsically disordered proteins (IDPs) code for their conformational dynamics is poorly understood. Here, we combined NMR spectroscopy, small-angle X-ray scattering (SAXS), and molecular dynamics (MD) simulations to characterize the ...
Alan Hicks   +3 more
doaj   +1 more source

Decoding F508del Misfolding in Cystic Fibrosis

open access: yesBiomolecules, 2014
The functional deficiency of the cystic fibrosis transmembrane conductance regulator (CFTR), a plasma membrane chloride channel, leads to the development of cystic fibrosis.
Xiaodong Robert Wang, Chenglong Li
doaj   +1 more source

Studying protein-protein interactions using peptide arrays [PDF]

open access: yes, 2010
Screening of arrays and libraries of compounds is well-established as a high-throughput method for detecting and analyzing interactions in both biological and chemical systems. Arrays and libraries can be composed from various types of molecules, ranging
Rito, T.   +7 more
core   +1 more source

MAD1: Kinetochore Receptors and Catalytic Mechanisms

open access: yesFrontiers in Cell and Developmental Biology, 2018
The mitotic checkpoint monitors kinetochore-microtubule attachment, delays anaphase onset and prevents aneuploidy when unattached or tensionless kinetochores are present in cells.
Yibo Luo, Ejaz Ahmad, Song-Tao Liu
doaj   +1 more source

Development and Validation of Optimization Methods for the Design of Protein Sequences and Combinatorial Libraries [PDF]

open access: yes, 2009
To facilitate the design of protein sequences with desired properties, simulation techniques have been developed to allow large portions of amino acid sequence space to be evaluated by computer.
Allen, Benjamin Daniel
core   +1 more source

Structural analysis of the starfish SALMFamide neuropeptides S1 and S2: The N-terminal region of S2 facilitates self-association [PDF]

open access: yes, 2014
The neuropeptides S1 (GFNSALMFamide) and S2 (SGPYSFNSGLTFamide), which share sequence similarity, were discovered in the starfish Asterias rubens and are prototypical members of the SALMFamide family of neuropeptides in echinoderms.
Jones, Christopher E. (R15179)   +9 more
core   +1 more source

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