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Towards accurate genomic detection of fungal antimicrobial resistance: progress in fungal resistance databases and bioinformatic tools. [PDF]
Microb GenomGador-Whyte AP +9 more
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Protein sequence databases [PDF]
Current Opinion in Chemical Biology, 2004 A variety of protein sequence databases exist, ranging from simple sequence repositories, which store data with little or no manual intervention in the creation of the records, to expertly curated universal databases that cover all species and in which the original sequence data are enhanced by the manual addition of further information in each ...
Rolf Apweiler +2 more
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Protein Databases on the Internet
Current Protocols in Protein Science, 2012AbstractProtein databases have become a crucial part of modern biology. Huge amounts of data for protein structures, functions, and particularly sequences are being generated. Searching databases is often the first step in the study of a new protein.
Dong Xu
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Current Opinion in Biotechnology, 2001
Life depends on the interaction of proteins. The availability of the complete human genome sequence has highlighted the need for a tool to analyse protein interactions and several databases have been compiled for this purpose. These databases document, categorize, and analyze interacting proteins and the cellular functions of the interactions.
I, Xenarios, D, Eisenberg
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Life depends on the interaction of proteins. The availability of the complete human genome sequence has highlighted the need for a tool to analyse protein interactions and several databases have been compiled for this purpose. These databases document, categorize, and analyze interacting proteins and the cellular functions of the interactions.
I, Xenarios, D, Eisenberg
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Databases for Protein–Protein Interactions
2021Protein-protein interaction networks have a crucial role in biological processes. Proteins perform multiple functions in forming physical and functional interactions in cellular systems. Information concerning an enormous number of protein interactions in a wide range of species has accumulated and has been integrated into various resources for ...
Natsu, Nakajima +2 more
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Nature Biotechnology, 1997
As a followup to last month`s column on nucleic acid databases, we now turn our attention to the world of proteins. The resources we list in the accompanying table include databases where you can search for specific protein sequences, find two-dimensional protein gel data, or align protein structures.
R, Peters, R S, Sikorski
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As a followup to last month`s column on nucleic acid databases, we now turn our attention to the world of proteins. The resources we list in the accompanying table include databases where you can search for specific protein sequences, find two-dimensional protein gel data, or align protein structures.
R, Peters, R S, Sikorski
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Molecular Biotechnology, 2009
Web-based protein structure databases come in a wide variety of types and levels of information content. Those having the most general interest are the various atlases that describe each experimentally determined protein structure and provide useful links, analyses, and schematic diagrams relating to its 3D structure and biological function.
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Web-based protein structure databases come in a wide variety of types and levels of information content. Those having the most general interest are the various atlases that describe each experimentally determined protein structure and provide useful links, analyses, and schematic diagrams relating to its 3D structure and biological function.
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2015
The scientific community's major conceptual notion of structural biology has recently shifted in emphasis from the classical structure-function paradigm due to the emergence of intrinsically disordered proteins (IDPs). As opposed to their folded cousins, these proteins are defined by the lack of a stable 3D fold and a high degree of inherent structural
VÁRADI, Mihály, Tompa, Peter
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The scientific community's major conceptual notion of structural biology has recently shifted in emphasis from the classical structure-function paradigm due to the emergence of intrinsically disordered proteins (IDPs). As opposed to their folded cousins, these proteins are defined by the lack of a stable 3D fold and a high degree of inherent structural
VÁRADI, Mihály, Tompa, Peter
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2009
The near exponential growth in protein sequence data is at the foundation of transformations in biological research and related technological developments. The use of protein sequence data is widespread in fields including agronomy, biochemistry, ecology, etymology, evolution, genetics, genetic engineering, genomics, molecular phylogenetics and ...
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The near exponential growth in protein sequence data is at the foundation of transformations in biological research and related technological developments. The use of protein sequence data is widespread in fields including agronomy, biochemistry, ecology, etymology, evolution, genetics, genetic engineering, genomics, molecular phylogenetics and ...
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Compression of protein sequence databases
Bioinformatics, 1995We have created an algorithm for compressing a PIR database to assist individual researchers and software developers who utilize sequence database information but may not have huge storage space. The resulting compact databank contains compressed PIR information and an interface written in C which allows fast direct access to the stored information ...
Victor B. Strelets, Hwa A. Lim
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