Results 21 to 30 of about 1,170,066 (317)
PLoS ONE, 2021 Protein secondary structure prediction (SSP) has a variety of applications; however, there has been relatively limited improvement in accuracy for years.
Teng-Ruei Chen +4 more
doaj +1 more source
The hydration of protein secondary structures
FEBS Letters, 1987 The hydration of the main‐chain carbonyl (CO) groups in proteins have been studied using infra‐red spectroscopy, and computer‐graphics analysis of high resolution protein crystal structures. The IR measurements indicate that the strength of water binding to the CO groups is lower in β‐sheet proteins compared with α‐helical ones. Analysis of the protein
P.L. Poole, David J. Barlow
openaire +3 more sources
SSEP: secondary structural elements of proteins [PDF]
Nucleic Acids Research, 2003 SSEP is a comprehensive resource for accessing information related to the secondary structural elements present in the 25 and 90% non-redundant protein chains. The database contains 1771 protein chains from 1670 protein structures and 6182 protein chains from 5425 protein structures in 25 and 90% non-redundant protein chains, respectively.
Shanthi, V +4 more
openaire +3 more sources
Molecular cloning and analysis of Myc modulator 1 (Mm-1) from Bufo gargarizans (Amphibia: Anura)
Zoologia (Curitiba), 2010 The protein of Myc modulator 1 (Mm-1) has been reported to repress the transcriptional activity of the proto-oncogene c-Myc in humans. Moreover, it was shown to be the subunit 5 of human prefoldin (PFD).
Ning Wang +3 more
doaj +1 more source
Pervasive, conserved secondary structure in highly charged protein regions.
PLoS Computational Biology, 2023 Understanding how protein sequences confer function remains a defining challenge in molecular biology. Two approaches have yielded enormous insight yet are often pursued separately: structure-based, where sequence-encoded structures mediate function, and
Catherine G Triandafillou +3 more
doaj +1 more source
Jeeva: Enterprise Grid-enabled Web Portal for Protein Secondary Structure Prediction [PDF]
, 2008 This paper presents a Grid portal for protein secondary structure prediction developed by using services of Aneka, a .NET-based enterprise Grid technology.
Buyya, Rajkumar +3 more
core +3 more sources
Sample Reduction Strategies for Protein Secondary Structure Prediction
Applied Sciences, 2019 Predicting the secondary structure from protein sequence plays a crucial role in estimating the 3D structure, which has applications in drug design and in understanding the function of proteins. As new genes and proteins are discovered, the large size of
Sema Atasever +3 more
doaj +1 more source
Predicting protein secondary structure based on ensemble Neural Network
ITEGAM-JETIA, 2021 Protein structure prediction is very vital to innovative process of discovering new medications based on the knowledge of a biological target. It is also useful for scientifically exposing the biological basis of convoluted diseases and drug effects ...
Emmanuel Gbenga Dada +3 more
doaj +1 more source
Multiple structural alignment for distantly related all b structures using TOPS pattern discovery and simulated annealing [PDF]
, 2003 Topsalign is a method that will structurally align diverse protein structures, for example, structural alignment of protein superfolds. All proteins within a superfold share the same fold but often have very low sequence identity and different biological
Gilbert, D, Westhead, DR, Williams, A
core +1 more source
Discovering the Ultimate Limits of Protein Secondary Structure Prediction
Biomolecules, 2021 Secondary structure prediction (SSP) of proteins is an important structural biology technique with many applications. There have been ~300 algorithms published in the past seven decades with fierce competition in accuracy.
Chia-Tzu Ho +4 more
doaj +1 more source