Results 21 to 30 of about 13,249,524 (287)
Prediction of protein-protein interaction types using association rule based classification [PDF]
, 2009 This article has been made available through the Brunel Open Access Publishing Fund - Copyright @ 2009 Park et alBackground: Protein-protein interactions (PPI) can be classified according to their characteristics into, for example obligate or transient ...
José A Reyes +14 more
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SSEP: secondary structural elements of proteins [PDF]
Nucleic Acids Research, 2003 SSEP is a comprehensive resource for accessing information related to the secondary structural elements present in the 25 and 90% non-redundant protein chains. The database contains 1771 protein chains from 1670 protein structures and 6182 protein chains from 5425 protein structures in 25 and 90% non-redundant protein chains, respectively.
Shanthi, V +4 more
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Molecular cloning and analysis of Myc modulator 1 (Mm-1) from Bufo gargarizans (Amphibia: Anura)
Zoologia (Curitiba), 2010 The protein of Myc modulator 1 (Mm-1) has been reported to repress the transcriptional activity of the proto-oncogene c-Myc in humans. Moreover, it was shown to be the subunit 5 of human prefoldin (PFD).
Ning Wang +3 more
doaj +1 more source
A convenient protein library for spectroscopic calibrations
Computational and Structural Biotechnology Journal, 2020 While several Raman, CD or FTIR spectral libraries are available for well-characterized proteins of known structure, proteins themselves are usually very difficult to acquire, preventing a convenient calibration of new instruments and new recording ...
Joëlle De Meutter, Erik Goormaghtigh
doaj +1 more source
A computer system to perform structure comparison using TOPS representations of protein structure [PDF]
, 2001 We describe the design and implementation of a fast topology–based method for protein structure comparison. The approach uses the TOPS topological representation of protein structure, aligning two structures using a common discovered pattern and ...
Viksna, J +3 more
core +6 more sources
ISSEC: inferring contacts among protein secondary structure elements using deep object detection
BMC Bioinformatics, 2020 Background The formation of contacts among protein secondary structure elements (SSEs) is an important step in protein folding as it determines topology of protein tertiary structure; hence, inferring inter-SSE contacts is crucial to protein structure ...
Qi Zhang +6 more
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The hydration of protein secondary structures
FEBS Letters, 1987 The hydration of the main‐chain carbonyl (CO) groups in proteins have been studied using infra‐red spectroscopy, and computer‐graphics analysis of high resolution protein crystal structures. The IR measurements indicate that the strength of water binding to the CO groups is lower in β‐sheet proteins compared with α‐helical ones. Analysis of the protein
Barlow, D.J., Poole, P.L.
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Protein secondary structure prediction (PSSP) using different machine algorithms
Egyptian Journal of Medical Human Genetics, 2021 Background The computational biology approach has advanced exponentially in protein secondary structure prediction (PSSP), which is vital for the pharmaceutical industry.
Heba M. Afify +3 more
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3-State Protein Secondary Structure Prediction based on SCOPe Classes
Brazilian Archives of Biology and Technology, 2021 Improving the accuracy of protein secondary structure prediction has been an important task in bioinformatics since it is not only the starting point in obtaining tertiary structure in hierarchical modeling but also enhances sequence analysis and ...
Sema Atasever +3 more
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Sample Reduction Strategies for Protein Secondary Structure Prediction
Applied Sciences, 2019 Predicting the secondary structure from protein sequence plays a crucial role in estimating the 3D structure, which has applications in drug design and in understanding the function of proteins. As new genes and proteins are discovered, the large size of
Sema Atasever +3 more
doaj +1 more source