Results 291 to 300 of about 3,139,545 (345)

Protein sequence analysis in the context of drug repurposing. [PDF]

BMC Med Inform Decis Mak
García Sánchez N, Ugarte Carro E, Prieto-Santamaría L, Rodríguez-González A.   +3 more
europepmc   +1 more source

ProteinF3S: boosting enzyme function prediction by fusing protein sequence, structure, and surface. [PDF]

Brief Bioinform
Yuan M, Shen A, Ma Y, Du J, An B, Wang M.   +5 more
europepmc   +1 more source

Protein Sequence Analysis landscape: A Systematic Review of Task Types, Databases, Datasets, Word Embeddings Methods, and Language Models. [PDF]

Database (Oxford)
Asim MN, Asif T, Hassan F, Dengel A.
europepmc   +1 more source

Integrating protein sequence design and evolutionary sequence conservation to uncover spectral tuning sites in red-light photoreceptors.

Structure
Eder OM, Totaro MG, Minnich S, Oberdorfer G, Winkler A.   +4 more
europepmc   +1 more source

Integrated analysis of protein sequence and structure redefines viral diversity and the taxonomy of the Flaviviridae

Simmonds P, Butković A, Grove J, Mayne R, Mifsud JCO, Beer M, Bukh J, Drexler JF, Kapoor A, Lohmann V, Smith DB, Stapleton JT, Vasilakis N, Kuhn JH.   +13 more
europepmc   +1 more source

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Protein Sequence Modules

Journal of Biomolecular Structure and Dynamics, 2005
Conserved protein sequence segments are commonly believed to correspond to functional sites in the protein sequence. A novel approach is proposed to profile the changing degree of conservation along the protein sequence, by evaluating the occurrence frequencies of all short oligopeptides of the given sequence in a large proteome database.
E, Aharonovsky, E N, Trifonov
openaire   +2 more sources

Protein sequence motifs

Current Opinion in Structural Biology, 1996
Protein sequence motifs are signatures of protein families and can often be used as tools for the prediction of protein function. The generalization and modification of already known motifs are becoming major trends in the literature, even though new motifs are still being discovered at an approximately linear rate.
P, Bork, E V, Koonin
openaire   +2 more sources

mRNA sequence predictions from homologous protein sequences

Journal of Theoretical Biology, 1985
A model has been developed that permits the prediction of mRNA nucleic acid sequence from the sequences of the translated proteins. The model relies on the information obtained from the comparison of protein sequences in related species to reduce the number of possible codons for those amino acids where mutations are observed.
G, Valiquette, E A, Zimmerman, J L, Roberts   +2 more
openaire   +2 more sources

Recently published protein sequences. III

Journal of Molecular Evolution, 1972
Some polypeptide sequences that have been published in the 1972 scientific literature are listed. Only selected sequences are included. The compilation has two objectives. Current information between periods when more comprehensive compilations are published is to be assembled and the use of data that do not include arrangements of unsequenced peptides
R, Holmquist, T H, Jukes
openaire   +4 more sources