Results 71 to 80 of about 18,939 (195)

CLAE: A High‐Fidelity Nanopore Sequencing Strategy for Read‐Level Viral Variant Detection and Environmental RNA Virus Discovery

open access: yesAdvanced Science, Volume 12, Issue 44, November 27, 2025.
High‐fidelity Nanopore sequencing offers a cost‐effective, portable path to uncovering viral dark matter in complex environments—but suffers from severe read‐length bias, low throughput, and limited accuracy. This study traces these limitations to core biochemical barriers and introduces CLAE, a foundational high‐fidelity platform that enables accurate,
Hannah Yu   +14 more
wiley   +1 more source

In-Host Flat-like Quasispecies: Characterization Methods and Clinical Implications

open access: yesMicroorganisms
The repeated failure to treat patients chronically infected with hepatitis E (HEV) and C (HCV) viruses, despite the absence of resistance-associated substitutions (RAS), particularly in response to prolonged treatments with the mutagenic agents of HEV ...
Josep Gregori   +17 more
doaj   +1 more source

Evolutionary trajectory of fish Piscine novirhabdovirus (=Viral Hemorrhagic Septicemia Virus) across its Laurentian Great Lakes history: Spatial and temporal diversification

open access: yesEcology and Evolution, 2020
Piscine novirhabdovirus = Viral Hemorrhagic Septicemia Virus (VHSV) first appeared in the Laurentian Great Lakes with large outbreaks from 2005 to 2006, as a new and novel RNA rhabdovirus subgenogroup (IVb) that killed >30 fish species. Interlude periods
Carol A. Stepien, Megan D. Niner
doaj   +1 more source

Unveiling of Evolution Pattern for HY12 Enterovirus Quasispecies and Pathogenicity Alteration

open access: yesViruses, 2021
Enterovirus, like the majority of RNA viruses, evolves to survive the changeable environments by a variety of strategies. Here, we showed that HY12 virus evolved to alter its characteristics and pathogenicity by employing a non-synonymous mutation ...
Xiaoran Chang   +7 more
doaj   +1 more source

A dynamical phase transition in a model for evolution with migration

open access: yes, 2010
Migration between different habitats is ubiquitous among biological populations. In this Letter, we study a simple quasispecies model for evolution in two different habitats, with different fitness landscapes, coupled through one-way migration. Our model
Allen, Rosalind J.   +2 more
core   +1 more source

Quasispecies evolution in general mean-field landscapes [PDF]

open access: yes, 2001
I consider a class of fitness landscapes, in which the fitness is a function of a finite number of phenotypic "traits", which are themselves linear functions of the genotype.
Baake E.   +9 more
core   +1 more source

A quasispecies on a moving oasis [PDF]

open access: yesTheoretical Population Biology, 2005
A population evolving in an inhomogeneous environment will adapt differently to different regions. We study the conditions under which such a population can maintain adaptations to a particular region when that region is not stationary, but can move. In particular, we study a quasispecies living near a favorable patch ("oasis") in the middle of a large
Desai, Michael M., Nelson, David R.
openaire   +4 more sources

Evolutionary games and quasispecies

open access: yes, 2002
We discuss a population of sequences subject to mutations and frequency-dependent selection, where the fitness of a sequence depends on the composition of the entire population.
Axelrod R.   +16 more
core   +3 more sources

Update on Hepatitis E Virus Infection 2025: Insights From an International Symposium

open access: yesLiver International, Volume 45, Issue 11, November 2025.
ABSTRACT Background and Aims The second Hepatitis E Symposium was held as an integral part of the International DFG/DZIF Joint Meeting on Viral Infections of the Liver and the Heart in Berlin. The symposium aimed to provide a comprehensive exploration of hepatitis E virus (HEV) research and bring together clinicians, basic scientists, public health ...
Lara Buchardt   +11 more
wiley   +1 more source

Cooperating H3N2 Influenza Virus Variants Are Not Detectable in Primary Clinical Samples

open access: yesmSphere, 2018
The high mutation rates of RNA viruses lead to rapid genetic diversification, which can enable cooperative interactions between variants in a viral population.
Katherine S. Xue   +3 more
doaj   +1 more source

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