Results 61 to 70 of about 50,812 (253)

Mobilization of LINE-1 retrotransposons is restricted by Tex19.1 in mouse embryonic stem cells

eLife, 2017
Mobilization of retrotransposons to new genomic locations is a significant driver of mammalian genome evolution, but these mutagenic events can also cause genetic disorders.
Marie MacLennan, Marta García-Cañadas, Judith Reichmann, Elena Khazina, Gabriele Wagner, Christopher J Playfoot, Carmen Salvador-Palomeque, Abigail R Mann, Paula Peressini, Laura Sanchez, Karen Dobie, David Read, Chao-Chun Hung, Ragnhild Eskeland, Richard R Meehan, Oliver Weichenrieder, Jose Luis García-Pérez, Ian R Adams   +17 more
doaj   +1 more source

The regulated retrotransposon transcriptome of mammalian cells

, 2009
Although repetitive elements pervade mammalian genomes, their overall contribution to transcriptional activity is poorly defined. Here, as part of the FANTOM4 project, we report that 6–30% of cap-selected mouse and human RNA transcripts initiate within ...
David A Hume, Carninci, P., Plessy, Charles, Kate Schroder, Shivangi Wani, Wani, S., Kawai, J., Carninci, Piero, Yoshihide Hayashizaki, Irvine, Katharine, Takahiro Arakawa, Daub, Carsten, Hornig, Nadine, Charles Plessy, Arakawa, T., Schroder, Kate, Kimura, Yasumasa, Nadine Hornig, Kimura, Y., Suzuki, Harukazu, Grimmond, Sean, Suzuki, H., Jun Kawai, Orlando, Valerio, Geoffrey J Faulkner, Takahashi, H., Hume, D.A., Valerio Orlando, Anita L Steptoe, Faulkner, Geoffrey J., Hume, David A., Wani, Shivangi, Steptoe, Anita, Forrest, Alistair, Lassmann, T., Faulkner, G.J., Steptoe, A.L., Takahash, Hazuki, Waki, K., Hume, David, Hazuki Takahashi, Grimmond, S.M., Piero Carninci, Forrest, Alistair R. R., Irvine, K.M., Yasumasa Kimura, Nicole Cloonan, Forrest, A.R.R., Daub, C.O., Lassmann, Timo, Faulkner, Geoffrey, Arakawa, Takahiro, Cloonan, N., Hornig, N., Waki, Kazunori, Steptoe, Anita L., Harukazu Suzuki, Kawai, Jun, Cloonan, Nicole, Takahashi, Hazuki, Sean M Grimmond, Timo Lassmann, Hayashizaki, Yoshihide, Daub, Carsten O., Schroder, K., Grimmond, Sean M., Katharine M Irvine, Alistair R R Forrest, Irvine, Katharine M., Orlando, V., Carsten O Daub, Kazunori Waki, Hayashizaki, Y., Plessy, C.   +73 more
core   +1 more source

DISTINCTIVE SIRE1 RETROTRANSPOSON PATTERNS ON BARLEY CHROMOSOMES?

, 2021
SIRE1 is an active and relatively high copy-number retroelement belongs to the Tyl/Copia long terminal repeat (LTR) retrotransposon superfamily. Distinctive SIRE1 elements (ENV and GAG) distributions in barley genome were observed by using fluorescent in
Nermin GOZUKİRMİZİ, Karlık, Elif, Gozukirmizi, Nermin, Elif KARLIK, Elif Karlık, Karlik, Elif   +5 more
core   +2 more sources

Noncanonical Nucleotides in the Genome Around the Maternal‐Zygotic Transition

Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, EarlyView.
In this paper, Kazzazi et al. provide a comprehensive review of the dynamics of nonconventional nucleotides in the genome during early developmental stages, hypothesizing a potential role for these nucleotides in the activation of the zygotic genome. ABSTRACT From the very moment of fertilization and throughout development, the cells of animal embryos ...
Latifa Kazzazy, Dávid Mező, Kinga K. Nagy, Viktória Perey‐Simon, Judit Tóth, Angéla Békési, Beáta Vértessy, Máté Varga   +7 more
wiley   +1 more source

Near‐T2T genome assembly of Erigeron sumatrensis provides insights into polyploid evolution and the herbicidal efficiency of HPPD inhibitors

New Plant Protection, EarlyView.
The near‐T2T genome assembly of Erigeron sumatrensis reveals an allohexaploid origin, evolution, and the interaction between the herbicidal target of the HPPD family and mesotrione. Abstract Species of Erigeron, members of the family Asteraceae, have invaded and adapted to agricultural fields and uncultivated habitats worldwide. Erigeron sumatrensis is
Yingying Wang, Jian Zhao, Jiao Zhang, Yaliang Shi, Xin Zhang, Feng Luo, Lianyang Bai, Meiliang Zhou, Zuren Li   +8 more
wiley   +1 more source

RNA methylation in retrotransposon control [PDF]

N6-methyladenosine (m6A) regulates retrotransposon activity, shifting between repression and activation across different species and developmental stages.
Cho, Jungnam, Barter, Basil
core   +1 more source

The 5' untranslated region of the I factor, a long interspersed nuclear element-like retrotransposon of Drosophila melanogaster, contains an internal promoter and sequences that regulate expression [PDF]

, 1993
The I-R system of hybrid dysgenesis in Drosophila melanogaster is controlled by a long interspersed nuclear element-like retroposon, the I factor.
FINNEGAN, D J, Finnegan, David, MCLEAN, C, BUCHETON, A   +3 more
core   +1 more source

From knowledge to action: the importance of characterizing herbicide resistance mechanisms for implementing management strategies

Pest Management Science, EarlyView.
This review bridges the gap between understanding resistance mechanisms and applying them in weed management, highlighting how mechanistic insights reveal vulnerabilities that can guide more effective control strategies. Abstract Herbicide resistance remains one of the most intensively studied areas in weed science because of its direct consequences ...
Luan Cutti, Eric L. Patterson, Todd A. Gaines, Aldo Merotto   +3 more
wiley   +1 more source

Transposons as Tools for Future Genome Engineering in Yeasts and Filamentous Fungi

Yeast, EarlyView.
Applications of transposon‐based tools for genome engineering in fungi include transposon‐mediated mutagenesis and targeted genomic integration. ABSTRACT Transposons are fundamental genetic elements that have profoundly shaped the architecture of eukaryotic genomes.
Bingyin Peng, Masahiro Tominaga, Chengqiang Wang, Robert E. Speight, Jun Ishii   +4 more
wiley   +1 more source

Chromosome‐Level Genome Assemblies of Two Softshell Turtles with ZZ/ZW Provide Insights into TE‐Driven Recombination Suppression in Sex Chromosomes

Integrative Zoology, EarlyView.
This study presents the first genomic identification and characterization of ZW sex chromosomes in two soft‐shelled turtle species through genome assembly and resequencing. We reveal the structural organization of ZW chromosomes, identifying both pseudoautosomal regions (PARs) and differentiated regions.
Jianjun Liu, Zhiyuan Yang, Min Tang, Tingting Chen, Siqi Liu, Ziyao Meng, Xingjiang Bu, Xingquan Xia, Guang Yang, Liuwang Nie   +9 more
wiley   +1 more source