Results 161 to 170 of about 16,252 (205)

Implementing recombineering, Ribo-seq and DYI imaging to study plant hormones.

, 2019
Every aspect of a plant life cycle, from germination to senescence, is coordinated by a small group of plant hormones. These small molecules do not work in isolation but through a complex network of interactions. In order to uncover the intricate interactions between different plant hormones, we have implemented a variety of technological tools, among ...
openaire   +1 more source

Identifying and Visualizing Novel Small Open Reading Frames (sORFs) Via Ribo-Seq, Transcriptome Assembly, and ggRibo. [PDF]

Methods Mol Biol
Wu HL, Kaufman ID, Hsu PY.
europepmc   +1 more source

The use of Benzonase to produce ribosome footprints simplifies translational levels quantification by Ribo-seq

ABSTRACTGene expression quantification through genomics methods is crucial for understanding diverse biological contexts. Among these methods, ribosome profiling (Ribo-seq) stands out as a valuable tool for uncovering post-transcriptional gene expression regulation by providing a comprehensive view of the translatome.
Guillermo Eastman, George S. Bloom, José R. Sotelo-Silveira   +2 more
openaire   +2 more sources

Ribo-Seq Analysis-Based Elucidation of the Dynamic Translation Landscape of Yak Ovarian Tissues in Different Reproductive Stages. [PDF]

FASEB J
Hu L, Guo S, Cao M, Xiong L, Ding Z, Kang Y, Zhang B, Cai B, Pei J, Guo X.   +9 more
europepmc   +1 more source

Comprehensive profiling of ribo-seq detected small sequences in yeast reveals robust conservation patterns and their potential mechanisms of origin. [PDF]

BMC Genomics
Reyes Loaiciga C, Li W, Zhao XQ, Li J.
europepmc   +1 more source

New insights into the efficient secretion of foreign protein in Bacillus subtilis via Ribo-seq and RNA-seq integrative analyses. [PDF]

BMC Microbiol
Miao H, Xiang X, Cheng L, Wu Q, Huang Z.
europepmc   +1 more source

The Translatome Map: RNC-Seq vs. Ribo-Seq for Profiling of HBE, A549, and MCF-7 Cell Lines. [PDF]

Int J Mol Sci
Kozlova A, Sarygina E, Ilgisonis E, Tarbeeva S, Ponomarenko E.   +4 more
europepmc   +1 more source

Identification of genes associated with sperm storage capacity in hens at different times after insemination by RNA-seq and Ribo-seq. [PDF]

BMC Genomics
Chai R, Xiao C, Yang Z, Du W, Lv K, Zhang J, Yang X.   +6 more
europepmc   +1 more source

deltaTE: Detection of Translationally Regulated Genes by Integrative Analysis of Ribo-seq and RNA-seq Data. [PDF]

Curr Protoc Mol Biol, 2019
Chothani S, Adami E, Ouyang JF, Viswanathan S, Hubner N, Cook SA, Schafer S, Rackham OJL.   +7 more
europepmc   +1 more source

Translation inhibitors cause abnormalities in ribosome profiling experiments [PDF]

, 2015
Lyon, Gholson J.
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