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Dynamics of the canonical RNA degradosome components during glucose stress

Biochimie, 2021
The RNA Degradosome (RNAD) is a multi-enzyme complex, which performs important functions in post-transcriptional regulation in Escherichia coli with the assistance of regulatory sRNAs and the RNA chaperone Hfq. Although the interaction of the canonical RNAD components with RNase E has been extensively studied, the dynamic nature of the interactions in ...
Marcos Emmanuel Jaso-Vera   +3 more
openaire   +2 more sources

Current perspectives of the Escherichia coli RNA degradosome

Biotechnology Letters, 2011
Many biological processes in the cell are linked to RNA metabolism and therefore have implications for a wide range of biotechnological applications. The processing and degradation of RNA plays an important role in RNA metabolism with often the same enzymes being involved in both processes.
Adélle, Burger   +2 more
openaire   +2 more sources

Escherichia coli RNA Degradosome

2001
Publisher Summary The Escherichia coli RNA degradosome is a nucleolytic complex containing four integral components: ribonuclease E (RNase E), polynucleotide phosphorylase (PNPase), RNA helicase B (RhlB), and enolase. This complex was discovered during efforts to purify and characterize RNase E, which is a singlestrand-specific endoribonuclease ...
A J, Carpousis   +3 more
openaire   +2 more sources

Analysis of the RNA degradosome complex in Vibrio angustum S14

The FEBS Journal, 2010
The RNA degradosome is built on the C‐terminal half of ribonuclease E (RNase E) which shows high sequence variation, even amongst closely related species. This is intriguing given its central role in RNA processing and mRNA decay. Previously, we have identified RhlB (ATP‐dependent DEAD‐box RNA helicase)‐binding, PNPase (polynucleotide phosphorylase ...
Melissa A, Erce   +2 more
openaire   +2 more sources

Polyphosphate kinase is a component of the Escherichia coli RNA degradosome

Molecular Microbiology, 1997
The Escherichia coli degradosome is a multienzyme complex with four major protein components: the endoribonuclease RNase E, the exoribonuclease PNPase, the RNA helicase RhlB and enolase. The first three of these proteins are known to have important functions in mRNA processing and degradation.
E, Blum   +3 more
openaire   +2 more sources

Analysis of the Escherichia coli RNA degradosome composition by a proteomic approach

Biochimie, 2006
The RNA degradosome is a bacterial protein machine devoted to RNA degradation and processing. In Escherichia coli it is typically composed of the endoribonuclease RNase E, which also serves as a scaffold for the other components, the exoribonuclease PNPase, the RNA helicase RhlB, and enolase.
M.E. Regonesi   +7 more
openaire   +4 more sources

The assembly and distribution in vivo of the Escherichia coli RNA degradosome

Biochimie, 2013
We report an analysis in vivo of the RNA degradosome assembly of Escherichia coli. Employing fluorescence microscopy imaging and fluorescence energy transfer (FRET) measurements, we present evidence for in vivo pairwise interactions between RNase E-PNPase (polynucleotide phosphorylase), and RNase E-Enolase.
Lilianha, Domínguez-Malfavón   +4 more
openaire   +2 more sources

Preparation of Escherichia coli Rne Protein and Reconstitution of RNA Degradosome

2001
Publisher Summary This chapter describes methods for the purification of Rne, the key scaffold in the assembly process, and for the reconstitution of active degradosomes from individually purified enzymes. The endoribonuclease RNase E was initially described as an activity required for the penultimate step in the maturation of 5S rRNA, the processing
G A, Mackie   +4 more
openaire   +2 more sources

Towards Understanding Helicase and Chaperone Activities in the RNA Degradosome

2020
The E. coli RNA degradosome is a complex multi-enzyme machine which is central to the post-transcriptional regulation of the cell. Some of its functions include maturing and processing sRNA, rRNA, and tRNA, as well as degrading mRNA. The key components of the RNA degradosome include the endoribonuclease RNase E, the DEAD-box RNA helicase RhlB, the ...
openaire   +1 more source

A proteomic approach to the analysis of RNA degradosome composition in Escherichia coli.

Methods in enzymology, 2008
The RNA degradosome is a bacterial protein machine devoted to RNA degradation and processing. In Escherichia coli, it is typically composed of the endoribonuclease RNase E, which also serves as a scaffold for the other components: the exoribonuclease PNPase, the RNA helicase RhlB, and enolase.
P. Mauri, G. Dehò
openaire   +3 more sources

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