Results 21 to 30 of about 601,872 (302)

Biologically stable threose nucleic acid-based probes for real-time microRNA detection and imaging in living cells

open access: yesMolecular Therapy: Nucleic Acids, 2022
We successfully fabricated threose nucleic acid (TNA)-based probes for real-time monitoring of target miRNA levels in cells. Our TNA probe is comprised of a fluorophore-labeled TNA reporter strand by partially hybridizing to a quencher-labeled TNA that ...
Fei Wang   +5 more
doaj   +1 more source

Electrochemical detection of the toxic dinoflagellate Alexandrium ostenfeldii with a DNA-biosensor [PDF]

open access: yes, 2005
The steady rise of observations of harmful or toxic algal blooms throughout the world in the past decades constitute a menace for coastal ecosystems and human interests.
Huljic, S.   +3 more
core   +1 more source

Using amino-labeled nucleotide probes for simultaneous single molecule RNA-DNA FISH. [PDF]

open access: yesPLoS ONE, 2014
Using amino-labeled oligonucleotide probes, we established a simple, robust and low-noise method for simultaneous detection of RNA and DNA by fluorescence in situ hybridization, a highly useful tool to study the large pool of long non-coding RNAs being ...
Reelina Basu   +5 more
doaj   +1 more source

Noncoder : a web interface for exon array-based detection of long non-coding RNAs [PDF]

open access: yes, 2012
Due to recent technical developments, a high number of long non-coding RNAs (lncRNAs) have been discovered in mammals. Although it has been shown that lncRNAs are regulated differently among tissues and disease statuses, functions of these transcripts ...
Braun, Thomas   +3 more
core   +1 more source

Miniaturized fluorescent RNA dot blot method for rapid quantitation of gene expression

open access: yesBMC Biotechnology, 2004
Background RNA dot blot hybridization is a commonly used technique for gene expression assays. However, membrane based RNA dot/slot blot hybridization is time consuming, requires large amounts of RNA, and is less suited for parallel assays of more than ...
Yadetie Fekadu   +4 more
doaj   +1 more source

SnapShot: RNA Structure Probing Technologies

open access: yesCell, 2018
Chemical probing coupled to high-throughput sequencing offers a flexible approach to uncover many aspects of RNA structure relevant to its cellular function. With a wide variety of chemical probes available that each report on different features of RNA molecules, a broad toolkit exists for investigating in vivo and in vitro RNA structure and ...
Paul D, Carlson   +4 more
openaire   +2 more sources

Probing RNA structure in vivo

open access: yesCurrent Opinion in Structural Biology, 2019
RNA structure underpins many essential functions in biology. New chemical reagents and techniques for probing RNA structure in living cells have emerged in recent years. High-throughput, genome-wide techniques such as Structure-seq2 and DMS-MaPseq exploit nucleobase modification by dimethylsulfate (DMS) to obtain complete structuromes, and are ...
David, Mitchell   +2 more
openaire   +3 more sources

Probe Generation Directly from Small Numbers of Cells for DNA Microarray Studies

open access: yesBioTechniques, 2003
Recently, we described a technique that allows us to prepare probes for expression profiling from 0.5–1 μg RNA without template or signal amplification.
C.C. Xiang   +6 more
doaj   +1 more source

Rapid, tunable, and multiplexed detection of RNA using convective array PCR

open access: yesCommunications Biology, 2023
Detection of RNA targets is typically achieved through RT-qPCR or RNAseq. RT-qPCR is rapid but limited in number and complexity of targets detected, while RNAseq is high-throughput but takes multiple days.
Andrew T. Sullivan   +9 more
doaj   +1 more source

Physico-chemical foundations underpinning microarray and next-generation sequencing experiments [PDF]

open access: yes, 2013
Hybridization of nucleic acids on solid surfaces is a key process involved in high-throughput technologies such as microarrays and, in some cases, next-generation sequencing (NGS).
A. Buhot   +70 more
core   +3 more sources

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