Results 31 to 40 of about 616,337 (352)

Rapid, tunable, and multiplexed detection of RNA using convective array PCR

open access: yesCommunications Biology, 2023
Detection of RNA targets is typically achieved through RT-qPCR or RNAseq. RT-qPCR is rapid but limited in number and complexity of targets detected, while RNAseq is high-throughput but takes multiple days.
Andrew T. Sullivan   +9 more
doaj   +1 more source

SnapShot: RNA Structure Probing Technologies

open access: yesCell, 2018
Chemical probing coupled to high-throughput sequencing offers a flexible approach to uncover many aspects of RNA structure relevant to its cellular function. With a wide variety of chemical probes available that each report on different features of RNA molecules, a broad toolkit exists for investigating in vivo and in vitro RNA structure and ...
Paul D, Carlson   +4 more
openaire   +2 more sources

Direct detection of Plasmodium female gametocyte-specific transcript s25 mRNA in blood by CLIP-PCR [PDF]

open access: yesJichu yixue yu linchuang, 2022
Objective To establish a molecular detection method for the Plasmodium female gametocyte. Methods Probes for capture and ligation probe-PCR (CLIP-PCR) were specific designed based on Plasmodium female gametocyte special RNA targets, which were the ...
YANG Jun-yuan, PIAN Hong-ru, YANG Ming-zhu, ZHENG Zhi
doaj   +1 more source

Fluorescent labeling of plasmid DNA and mRNA : gains and losses of current labeling strategies [PDF]

open access: yes, 2016
Live-cell imaging has provided the life sciences with insights into the cell biology and dynamics. Fluorescent labeling of target molecules proves to be indispensable in this regard. In this Review, we focus on the current fluorescent labeling strategies
Rombouts, Koen   +2 more
core   +1 more source

Probing RNA structure in vivo

open access: yesCurrent Opinion in Structural Biology, 2019
RNA structure underpins many essential functions in biology. New chemical reagents and techniques for probing RNA structure in living cells have emerged in recent years. High-throughput, genome-wide techniques such as Structure-seq2 and DMS-MaPseq exploit nucleobase modification by dimethylsulfate (DMS) to obtain complete structuromes, and are ...
David, Mitchell   +2 more
openaire   +3 more sources

Probe Generation Directly from Small Numbers of Cells for DNA Microarray Studies

open access: yesBioTechniques, 2003
Recently, we described a technique that allows us to prepare probes for expression profiling from 0.5–1 μg RNA without template or signal amplification.
C.C. Xiang   +6 more
doaj   +1 more source

In vitro identification and in silico utilization of interspecies sequence similarities using GeneChip(® )technology [PDF]

open access: yes, 2005
BACKGROUND: Genomic approaches in large animal models (canine, ovine etc) are challenging due to insufficient genomic information for these species and the lack of availability of corresponding microarray platforms. To address this problem, we speculated
Garcia, Joe GN   +5 more
core   +3 more sources

Metabolic RNA labeling for probing RNA dynamics in bacteria [PDF]

open access: yesNucleic Acids Research, 2020
Abstract Metabolic labeling of RNAs with noncanonical nucleosides that are chemically active, followed by chemoselective conjugation with imaging probes or enrichment tags, has emerged as a powerful method for studying RNA transcription and degradation in eukaryotes.
Liying Meng   +5 more
openaire   +2 more sources

Development of a Chemiluminescence-Based Ribonuclease Protection Assay

open access: yesBioTechniques, 2002
The ribonuclease protection assay (RPA) is a widely used method for the detection and quantification of specific mRNA transcripts in a complex mixture of total RNA or mRNA molecules. While exhibiting many advantages over other RNA detection methods, RPAs
Christopher Rosenau   +2 more
doaj   +1 more source

Nanoribbon-Based Electronic Detection of a Glioma-Associated Circular miRNA

open access: yesBiosensors, 2021
Nanoribbon chips, based on “silicon-on-insulator” structures (SOI-NR chips), have been fabricated. These SOI-NR chips, whose surface was sensitized with covalently immobilized oligonucleotide molecular probes (oDNA probes), have been employed for the ...
Yuri D. Ivanov   +18 more
doaj   +1 more source

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