Results 11 to 20 of about 6,424,932 (374)
Sequence complexity for biological sequence analysis [PDF]
Computers & Chemistry, 2000 A new statistical model for DNA considers a sequence to be a mixture of regions with little structure and regions that are approximate repeats of other subsequences, i.e. instances of repeats do not need to match each other exactly. Both forward- and reverse-complementary repeats are allowed.
Lloyd Allison +3 more
openaire +5 more sources
RNA Sequencing and Analysis [PDF]
Cold Spring Harbor Protocols, 2015 RNA sequencing (RNA-Seq) uses the capabilities of high-throughput sequencing methods to provide insight into the transcriptome of a cell. Compared to previous Sanger sequencing- and microarray-based methods, RNA-Seq provides far higher coverage and greater resolution of the dynamic nature of the transcriptome.
Kimberly R. Kukurba +1 more
openaire +3 more sources
Cross-Border Transmissions of the Delta Substrain AY.29 During Tokyo Olympic and Paralympic Games
Frontiers in Microbiology, 2022 Tokyo Olympic and Paralympic Games, postponed for the COVID-19 pandemic, were finally held in the summer of 2021. Just before the games, the Alpha variant was being replaced with the more contagious Delta variant.
Takahiko Koyama +6 more
doaj +1 more source
Digenic Mutations in Junctional Epidermolysis Bullosa in An Iranian Family [PDF]
Cell Journal, 2021 In this study, we describe one Iranian patient who was diagnosed with Epidermolysis Bullosa (EB) because of mutations in three candidate genes, including 3 mutations.
Kourosh Riahi +4 more
doaj +1 more source
Chromosome-specific families in Vibrio genomes
Frontiers in Microbiology, 2014 We have compared chromosome-specific genes in a set of 18 finished Vibrio genomes, and, in addition, also calculated the pan- and core-genomes from a data set of more than 250 draft Vibrio genome sequences.
Oksana eLukjancenko +2 more
doaj +1 more source
Visual analysis for drum sequence transcription [PDF]
, 2007 A system is presented for analysing drum performance video sequences. A novel ellipse detection algorithm is introduced that automatically locates drum tops.
Gillet, Olivier +3 more
core +1 more source
HostPhinder: A Phage Host Prediction Tool
Viruses, 2016 The current dramatic increase of antibiotic resistant bacteria has revitalised the interest in bacteriophages as alternative antibacterial treatment. Meanwhile, the development of bioinformatics methods for analysing genomic data places high-throughput ...
Julia Villarroel +6 more
doaj +1 more source
Sequence information gain based motif analysis [PDF]
, 2015 Background: The detection of regulatory regions in candidate sequences is essential for the understanding of the regulation of a particular gene and the mechanisms involved.
Marco, Santiago +3 more
core +3 more sources
Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios
BMC Bioinformatics, 2018 Background The adaptive immune response intrinsically depends on hypervariable human leukocyte antigen (HLA) genes. Concomitantly, correct HLA phenotyping is crucial for successful donor-patient matching in organ transplantation.
Maria Luisa Matey-Hernandez +3 more
doaj +1 more source
Spatiotemporal Barcodes for Image Sequence Analysis [PDF]
, 2015 Taking as input a time-varying sequence of two-dimensional (2D) binary images, we develop an algorithm for computing a spatiotemporal 0–barcode encoding lifetime of connected components on the image sequence over time.
González Díaz, Rocío +2 more
core +1 more source