Results 11 to 20 of about 30,598,754 (388)
Protein Sequence Analysis Using the MPI Bioinformatics Toolkit
Current Protocols in Bioinformatics, 2020 The MPI Bioinformatics Toolkit (https://toolkit.tuebingen.mpg.de) provides interactive access to a wide range of the best‐performing bioinformatics tools and databases, including the state‐of‐the‐art protein sequence comparison methods HHblits and HHpred.
Felix Gabler +7 more
semanticscholar +1 more source
Chromosome-specific families in Vibrio genomes
Frontiers in Microbiology, 2014 We have compared chromosome-specific genes in a set of 18 finished Vibrio genomes, and, in addition, also calculated the pan- and core-genomes from a data set of more than 250 draft Vibrio genome sequences.
Oksana eLukjancenko +2 more
doaj +1 more source
Visual analysis for drum sequence transcription [PDF]
, 2007 A system is presented for analysing drum performance video sequences. A novel ellipse detection algorithm is introduced that automatically locates drum tops.
Gillet, Olivier +3 more
core +1 more source
HostPhinder: A Phage Host Prediction Tool
Viruses, 2016 The current dramatic increase of antibiotic resistant bacteria has revitalised the interest in bacteriophages as alternative antibacterial treatment. Meanwhile, the development of bioinformatics methods for analysing genomic data places high-throughput ...
Julia Villarroel +6 more
doaj +1 more source
Spatiotemporal Barcodes for Image Sequence Analysis [PDF]
, 2015 Taking as input a time-varying sequence of two-dimensional (2D) binary images, we develop an algorithm for computing a spatiotemporal 0–barcode encoding lifetime of connected components on the image sequence over time.
González Díaz, Rocío +2 more
core +1 more source
Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios
BMC Bioinformatics, 2018 Background The adaptive immune response intrinsically depends on hypervariable human leukocyte antigen (HLA) genes. Concomitantly, correct HLA phenotyping is crucial for successful donor-patient matching in organ transplantation.
Maria Luisa Matey-Hernandez +3 more
doaj +1 more source
BEAST: Bayesian evolutionary analysis by sampling trees [PDF]
, 2007 Background The evolutionary analysis of molecular sequence variation is a statistical enterprise. This is reflected in the increased use of probabilistic models for phylogenetic inference, multiple sequence alignment, and molecular population genetics ...
Drummond, Alexei J., Rambaut, Andrew
core +3 more sources
In Silico Analysis of Neutralizing Antibody Epitopes on The Hepatitis C Virus Surface Glycoproteins [PDF]
Cell Journal, 2023 Objective: Despite of antiviral drugs and successful treatment, an effective vaccine against hepatitis C virus (HCV)infection is still required. Recently, bioinformatic methods same as prediction algorithms, have greatly contributed tothe use of peptides
Raziyeh Zareh-Khoshchehreh +4 more
doaj +1 more source
What Can We Learn from a Metagenomic Analysis of a Georgian Bacteriophage Cocktail?
Viruses, 2015 Phage therapy, a practice widespread in Eastern Europe, has untapped potential in the combat against antibiotic-resistant bacterial infections. However, technology transfer to Western medicine is proving challenging. Bioinformatics analysis could help to
Henrike Zschach +11 more
doaj +1 more source
Sequence complexity for biological sequence analysis [PDF]
Computers & Chemistry, 2000 A new statistical model for DNA considers a sequence to be a mixture of regions with little structure and regions that are approximate repeats of other subsequences, i.e. instances of repeats do not need to match each other exactly. Both forward- and reverse-complementary repeats are allowed.
Lloyd Allison +3 more
openaire +3 more sources