Results 261 to 270 of about 234,936 (321)

Short Tandem Repeats and Genetic Variation

2010
Single nucleotide polymorphisms (SNPs) are widely distributed in the human genome and although most SNPs are the result of independent point-mutations, there are exceptions. When studying distances between SNPs, a periodic pattern in the distance between pairs of identical SNPs has been found to be heavily correlated with periodicity in short tandem ...
Madsen, Bo Eskerod, Villesen, Palle, Wiuf, Carsten   +2 more
openaire   +3 more sources

Profiling Short Tandem Repeats from Short Reads

2013
Short tandem repeats (STRs), also known as microsatellites, have a wide range of applications, including medical genetics, forensics, and population genetics. High-throughput sequencing has the potential to profile large numbers of STRs, but cumbersome gapped alignment and STR-specific noise patterns hamper this task. We recently developed an algorithm,
Melissa, Gymrek, Yaniv, Erlich
openaire   +2 more sources

The short tandem repeat locus D3S1359

Forensic Science International, 1998
Short tandem repeats (STRs) are used by many laboratories throughout the world performing paternity testing or criminal casework. Nevertheless, many of the established STRs have obvious disadvantages such as low number of common alleles (e.g., hTPO, THO1) or alleles with frequencies of nearly 50% (e.g., hTPO, FES).
R, Pöltl, C, Luckenbach, H, Ritter
openaire   +2 more sources

Microchip‐based forensic short tandem repeat genotyping

ELECTROPHORESIS, 2015
Micro total analysis system (μTAS) or lab‐on‐a‐chip (LOC) technology has advanced over decades, and the high performance for chemical and biological analysis has been well demonstrated with advantages of low sample consumption, rapid analysis time, high‐throughput screening, and portability.
Yong Tae, Kim, Hyun Young, Heo, Shin Hye, Oh, Seung Hwan, Lee, Do Hyun, Kim, Tae Seok, Seo   +5 more
openaire   +2 more sources

Survey of plant short tandem DNA repeats

Theoretical and Applied Genetics, 1994
Length variations in simple sequence tandem repeats are being given increased attention in plant genetics. Some short tandem repeats (STRs) from a few plant species, mainly those at the dinucleotide level, have been demonstrated to show polymorphisms and Mendelian inheritance.
Z, Wang, J L, Weber, G, Zhong, S D, Tanksley   +3 more
openaire   +2 more sources

DNA Short Tandem Repeat Profiling of Morocco

Journal of Forensic Sciences, 2003
Abstract Blood samples were randomly collected on 186 unrelated males coming from all regions of Morocco. DNA was extracted using a Nucleon extraction kit (Amersham Life Science) and was genotyped with the Powerplex 16 kit (Promega) containing markers D3S1358, TH01, D21S11, D18S51, Penta E, D5S818, D13S317, D7S820, D16S539, CSF1PO, Penta
Alban, Jauffrit, Hamid, El Amri, Fabrice, Airaud, Marie-Thérèse, André, Odile, Herbert, Gaëlle, Landeau-Trottier, Stéphanie, Giraudet, Christel, Richard, André, Chaventré, Jean-Paul, Moisan   +9 more
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Dante: genotyping of known complex and expanded short tandem repeats

Bioinform., 2018
Motivation Short tandem repeats (STRs) are stretches of repetitive DNA in which short sequences, typically made of 2‐6 nucleotides, are repeated several times.
J. Budiš, M. Kucharík, F. Duris, Juraj Gazdarica, Michaela Zrubcová, A. Ficek, T. Szemeš, Broňa Brejová, J. Radvánszky   +8 more
semanticscholar   +1 more source

Population genetics of short tandem repeat (STR) loci

Genetica, 1995
To investigate the population genetics of short tandem repeat (STR) polymorphisms in human populations, we have studied the allele frequency distributions of four STR loci (HUMTH01, HUMVWA31, HUMF13A1 and HUMFES) in 16 different population surveys which can be categorised within three broadly defined ethnic groups: Caucasian, Asian (Indian subcontinent)
P, Gill, I, Evett
openaire   +2 more sources

Interlaboratory Evaluation of Short Tandem Repeat Triplex CTT

Journal of Forensic Sciences, 1997
Abstract An interlaboratory comparison of typing results for Short Tandem Repeats (STRs) at the GenBank loci HUMCSF1PO, HUMTPOX, HUMTH01, and HUMVWFA31 using the “CTT triplex” and “CTTv quadruplex” has been evaluated. These STRs all have a nominal four basepair (bp) repeat. Seven different samples were distributed to 41 laboratories. The
M C, Kline, D L, Duewer, P, Newall, J W, Redman, D J, Reeder, M, Richard   +5 more
openaire   +2 more sources

Short Tandem Repeat loci analysis in forensic casework

Anthropologischer Anzeiger, 2000
The development of polymerase chain reaction typing method has enhanced the possibilities of genetic identification of biological evidence samples for forensic caseworks. The authors report the use of multiplex amplification reactions associating several short tandem repeat loci.
B, Ludes, I, Clisson
openaire   +2 more sources