Results 21 to 30 of about 3,537,585 (186)

Short Tandem Repeats in plants: Genomic distribution and function prediction

Electronic Journal of Biotechnology, 2021
Background: Short Tandem repeats (STRs) existed as popular elements in both eukaryotic and prokaryotic genomes. Results: In this study, we analyzed the characteristics, distributions, and motif features of STRs within whole-genomes of 140 plant species ...
Lin Zhu, Hui Wu, Huayang Li, Heng Tang, Li Zhang, Houjuan Xu, Fangchan Jiao, Nian Wang, Long Yang   +8 more
doaj   +1 more source

LEPStr: A database for Mycobacterium leprae short tandem repeats

Informatics in Medicine Unlocked, 2020
Short tandem repeats are short arrays of nucleotide sequences, and they have vital roles in many biological processes, including modulation of transcription, enhancement of gene expression, adaptation to a particular environment, and link to autosomal ...
Partha Sarathi Mohanty, Dimple Saikia, Siddhant Kalra, Farah Naaz, Avi Kumar Bansal, Harpreet Singh Pawar, Keshar Kunja Mohanty, Sandeep Sharma, Manjula Singh, Shripad A. Patil   +9 more
doaj   +1 more source

Chromosomal Mapping of Tandem Repeats Revealed Massive Chromosomal Rearrangements and Insights Into Senna tora Dysploidy

Frontiers in Plant Science, 2021
Tandem repeats can occupy a large portion of plant genomes and can either cause or result from chromosomal rearrangements, which are important drivers of dysploidy-mediated karyotype evolution and speciation.
Nomar Espinosa Waminal, Remnyl Joyce Pellerin, Sang-Ho Kang, Hyun Hee Kim   +3 more
doaj   +1 more source

Investigation of a candidemia outbreak caused by C. parapsilosis in a pediatric hematology/oncology center [PDF]

Клиническая микробиология и антимикробная химиотерапия, 2020
Objective. To investigate a candidemia outbreak caused by C. parapsilosis in a clinical unit of the Dmitry Rogachev National Medical Research Center of Pediatric Hematology, Oncology and Immunology (NMRC PHOI). Materials and Methods.
Kozhushnaya O.S., Solopova G.G., Voropaev A.D., Markova Zh.V., Satsuk A.V., Balamozhnova A.O., Novichkova G.A.   +6 more
doaj   +1 more source

ProRepeat: an integrated repository for studying amino acid tandem repeats in proteins [PDF]

, 2011
ProRepeat (http://prorepeat.bioinformatics.nl/) is an integrated curated repository and analysis platform for in-depth research on the biological characteristics of amino acid tandem repeats.
Harm Nijveen, Lin, K., Jack A. M. Leunissen, K. Lin, Audrey David, Luo, H., Ke Lin, A. David, David, A., H. Nijveen, H. Luo, Leunissen, J.A.M., Nijveen, H., Hong Luo, J. A. M. Leunissen   +14 more
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Intragenic tandem repeats in Daphnia magna: structure, function and distribution [PDF]

, 2009
Background Expressed sequence tag (EST) databases provide a valuable source of genetic data in organisms whose genome sequence information is not yet compiled.
Ebert, Dieter, Dieter Ebert, Du Pasquier Louis, Du Pasquier, L., Ebert Dieter, Colson, I., Colson Isabelle, Isabelle Colson, Louis Du Pasquier   +8 more
core   +1 more source

Short Tandem Repeats genotyping results.

, 2023
All short tandem repeats polymorphic variants called from examined cyclophilin locus from TRACI WGS, TRACII WGS, and TRACII AmpliSeq datasets. (XLSX)
Rob W. van der Pluijm (6390596), Christina Assisi (14504886), Olivo Miotto (36337), Michal Kucharski (4383256), Josephine Boentoro (14504880), Arjen M. Dondorp (7305212), Jerzy Michal Dziekan (14504883), Sachel Mok (258479), Zbynek Bozdech (1561), Grennady Wirjanata (106259), Sourav Nayak (9263105)   +10 more
core   +1 more source

Linear time algorithms for finding and representing all the tandem repeats in a string [PDF]

, 2004
Gusfield D, Stoye J. Linear time algorithms for finding and representing all the tandem repeats in a string. Journal of computer and system sciences. 2004;69(4):525-546.A tandem repeat (or square) is a string [alpha][alpha], where [alpha] is a non-empty ...
Stoye, Jens, Stoye, Jens ; https://orcid.org/, Gusfield, Dan   +2 more
core   +1 more source

Tandem repeat copy-number variation in protein-coding regions of human genes [PDF]

, 2005
BACKGROUND: Tandem repeat variation in protein-coding regions will alter protein length and may introduce frameshifts. Tandem repeat variants are associated with variation in pathogenicity in bacteria and with human disease.
O'Dushlaine, Colm T., Edwards, Richard, Park, Stephen D., Richard J Edwards, Colm T O'Dushlaine, Denis C Shields, Shields, Denis C., Stephen D Park   +7 more
core   +1 more source

Diversity in coding tandem repeats in related Neisseria spp. [PDF]

, 2003
This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL - © 2003 Jordan et al; licensee BioMed Central Ltd ...
Jordan, P, Snyder, Lori A S, Snyder, Lori, Snyder, LAS, Saunders, Nigel, Lori AS Snyder, Saunders, NJ, Jordan Philip, Snyder, LA, Jordan, Philip, Philip Jordan, Saunders Nigel J, Nigel J Saunders, Saunders, Nigel J, Snyder Lori AS   +14 more
core   +1 more source