Results 31 to 40 of about 3,537,585 (186)

A Census of Tandemly Repeated Polymorphic Loci in Genic Regions Through the Comparative Integration of Human Genome Assemblies

Frontiers in Genetics, 2018
Polymorphic Tandem Repeat (PTR) is a common form of polymorphism in the human genome. A PTR consists in a variation found in an individual (or in a population) of the number of repeating units of a Tandem Repeat (TR) locus of the genome with respect to ...
Loredana M. Genovese, Filippo Geraci, Lucia Corrado, Eleonora Mangano, Romina D'Aurizio, Roberta Bordoni, Marco Severgnini, Giovanni Manzini, Giovanni Manzini, Gianluca De Bellis, Sandra D'Alfonso, Marco Pellegrini   +11 more
doaj   +1 more source

Simple and flexible detection of contiguous repeats using a suffix tree [PDF]

, 2002
Stoye J, Gusfield D. Simple and flexible detection of contiguous repeats using a suffix tree. Theoretical Computer Science. 2002;270(1-2):843-856.We study the problem of detecting all occurrences of (primitive) tandem repeats and tandem arrays in a ...
Jens Stoye, Stoye, Jens, Stoye, Jens ; https://orcid.org/, Gusfield, Dan, Dan Gusfield   +4 more
core   +1 more source

Applications of X-Chromosome Short Tandem Repeats for Human Identification: A Review

Journal of Tropical Life Science, 2023
The forensic DNA profiling technique has tremendously contributed to forensic human identification, an important aspect in forensic investigations.
Naji Arafat Mahat, Aedrianee Reeza Alwi, Faezah Mohd Salleh, Seri Mirianti Ishar, Mohammad Rahim Kamaluddin, Mohd Radzniwan A. Rashid   +5 more
doaj   +1 more source

Short tandem repeat polymorphism evolution in humans [PDF]

European Journal of Human Genetics, 1998
Forty-five dinucleotide short tandem repeat polymorphisms were typed in ten large samples of a globally distributed set of populations. Although these markers had been selected for high heterozygosity in European populations, we found them to be sufficiently informative for linkage analysis in non-Europeans.
F, Calafell, A, Shuster, W C, Speed, J R, Kidd, K K, Kidd   +4 more
openaire   +2 more sources

Mononucleotide repeats are asymmetrically distributed in fungal genes [PDF]

, 2008
Background Systematic analyses of sequence features have resulted in a better characterisation of the organisation of the genome. A previous study in prokaryotes on the distribution of sequence repeats, which are notoriously variable and can disrupt the ...
Graaff, L.H., de, de Graaff, L.H., van Passel Mark WJ, Passel, M.W.J., van, Mark WJ van Passel, Leo H de Graaff, van Passel, M.W.J., de Graaff Leo H   +7 more
core   +1 more source

Relatively semi-conservative replication and a folded slippage model for short tandem repeats

BMC Genomics, 2020
Background The ubiquitous presence of short tandem repeats (STRs) in virtually all genomes implicates their functional relevance, while a widely-accepted definition of STR is yet to be established. Previous studies majorly focus on relatively longer STRs,
Hongxi Zhang, Douyue Li, Xiangyan Zhao, Saichao Pan, Xiaolong Wu, Shan Peng, Hanrou Huang, Ruixue Shi, Zhongyang Tan   +8 more
doaj   +1 more source

Genetic investigation of the origin of an allograft ureteral carcinoma with short tandem repeats: From recipient or donor?

Urological Science, 2023
Purpose: The purpose of this study was to demonstrate the usefulness of genetic analysis with short tandem repeats (STRs) to identify the cellular origin of an unusual allograft urothelial carcinoma (UC).
Jia-Yuh Sheu, Jeff Shih-Chieh Chueh, Chao-Yuan Huang, Hsiao-Lin Hwa, Shuo-Meng Wang   +4 more
doaj   +1 more source

Condensin Promotes Position Effects within Tandem DNA Repeats via the RITS Complex

Cell Reports, 2016
Summary: Tandem repetitive DNA is highly abundant in eukaryotic genomes and contributes to transcription control and genome stability. However, how the individual sequences within tandem repeats behave remains largely unknown.
Haijin He, Shu Zhang, Danni Wang, Andreas Hochwagen, Fei Li   +4 more
doaj   +1 more source

Retrospective cell lineage reconstruction in humans by using short tandem repeats

Cell Reports: Methods, 2021
Summary: Cell lineage analysis aims to uncover the developmental history of an organism back to its cell of origin. Recently, novel in vivo methods utilizing genome editing enabled important insights into the cell lineages of animals.
Liming Tao, Ofir Raz, Zipora Marx, Manjusha S. Ghosh, Sandra Huber, Julia Greindl-Junghans, Tamir Biezuner, Shiran Amir, Lilach Milo, Rivka Adar, Ron Levy, Amos Onn, Noa Chapal-Ilani, Veronika Berman, Asaf Ben Arie, Guy Rom, Barak Oron, Ruth Halaban, Zbigniew T. Czyz, Melanie Werner-Klein, Christoph A. Klein, Ehud Shapiro   +21 more
doaj   +1 more source

RF: A method for filtering short reads with tandem repeats for genome mapping [PDF]

, 2013
Next-generation sequencing platforms generate short (50–150bp) reads that can be mapped onto the reference genome. Repetitive sequences in the genome, because of the presence of similar or identical sequences, cause mapping errors in the case of the ...
Misawa, Kazuharu
core   +1 more source