Results 51 to 60 of about 3,537,585 (186)
Microsatellite Stability in STR Analysis Aspergillus fumigatus Depends on Number of Repeat Units
Frontiers in Cellular and Infection Microbiology, 2019 More than a decade ago a short tandem repeat-based typing method was developed for the fungus Aspergillus fumigatus. This STRAf assay is based on the analysis of nine short tandem repeat markers.
Theun de Groot +3 more
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Systematic profiling of short tandem repeats in the cattle genome [PDF]
Genome Biology and Evolution, 2016 Short tandem repeats (STRs), or microsatellites, are genetic variants with repetitive 2–6 base pair motifs in many mammalian genomes. Using high-throughput sequencing and experimental validations, we systematically profiled STRs in five Holsteins.
Xu, Lingyang +10 more
openaire +2 more sources
Short tandem repeats bind transcription factors to tune eukaryotic gene expression
, 2023 Short tandem repeats bind transcription factors to tune eukaryotic gene expression.
Connor Horton
core +1 more source
Unexpected Properties of Short Genomic Tandem Repeats
, 2017 Length polymorphisms in genomic short tandem repeats have been implicated in a variety of diseases, most notably human neurodegenerative disorders. Expansions of tandem repeats are also associated with genomic instability in cancer. Our previous study of
Simon Kasif +3 more
core +1 more source
Database of exact tandem repeats in the Zebrafish genome
BMC Genomics, 2010 Background Sequencing of the approximately 1.7 billion bases of the zebrafish genome is currently underway. To date, few high resolution genetic maps exist for the zebrafish genome, based mainly on single nucleotide polymorphisms (SNPs) and short ...
Rouchka Eric C
doaj +1 more source
Integrated multiple sequence alignment [PDF]
, 2005 Sammeth M. Integrated multiple sequence alignment. Bielefeld (Germany): Bielefeld University; 2005.The thesis presents enhancements for automated and manual multiple sequence alignment: existing alignment algorithms are made more easily accessible and ...
Sammeth, Michael
core
Short Tandem Repeats in Human Exons: A Target for Disease Mutations
BMC Genomics, 2008 Background In recent years it has been demonstrated that structural variations, such as indels (insertions and deletions), are common throughout the genome, but the implications of structural variations are still not clearly understood.
Villesen Palle, Madsen Bo, Wiuf Carsten
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STRScan: targeted profiling of short tandem repeats in whole-genome sequencing data
BMC Bioinformatics, 2017 Background Short tandem repeats (STRs) are found in many prokaryotic and eukaryotic genomes, and are commonly used as genetic markers, in particular for identity and parental testing in DNA forensics.
Haixu Tang, Etienne Nzabarushimana
doaj +1 more source
Global abundance of short tandem repeats is non-random in rodents and primates
BMC Genomic Data, 2022 Background While of predominant abundance across vertebrate genomes and significant biological implications, the relevance of short tandem repeats (STRs) (also known as microsatellites) to speciation remains largely elusive and attributed to random ...
Masoud Arabfard +6 more
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A reference haplotype panel for genome-wide imputation of short tandem repeats
Nature Communications, 2018 Short-tandem repeats (STR), similar to single nucleotide polymorphisms (SNP), contribute to complex traits, but their ascertainment by next-generation sequencing is costly. Here, Saini et al.
Shubham Saini +4 more
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