Role of cyclic AMP in the control of cell-specific gene expression [PDF]
Genes have to be expressed in specific cell types at appropriate times of development dependent on external signals. cAMP signaling occurs in all cells, thus raising the question of how this signal transduction pattern is integrated into mechanisms ...
Boshart, Michael +3 more
core +1 more source
A hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number [PDF]
Motivation: cis-regulatory DNA sequence elements, such as enhancers and silencers, function to control the spatial and temporal expression of their target genes.
Woodcock, Dan J +8 more
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TLM-Quant : an open-source pipeline for visualization and quantification of gene expression heterogeneity in growing microbial cells [PDF]
Gene expression heterogeneity is a key driver for microbial adaptation to fluctuating environmental conditions, cell differentiation and the evolution of species. This phenomenon has therefore enormous implications, not only for life in general, but also
Piersma, Sjouke +25 more
core +1 more source
Consensus clustering and functional interpretation of gene-expression data [PDF]
Microarray analysis using clustering algorithms can suffer from lack of inter-method consistency in assigning related gene-expression profiles to clusters.
Liu, X +27 more
core +1 more source
MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells
In cancer, somatic mutations occur continuously, causing cell populations to evolve. These somatic mutations result in the evolution of cellular gene expression patterns that can also change due to epigenetic modifications and environmental changes.
Jared Huzar +8 more
openaire +3 more sources
Analysis of MicroRNA Regulation and Gene Expression Variability in Single Cell Data
MicroRNAs (miRNAs) regulate gene expression by binding to mRNAs, and thus reduce target gene expression levels and expression variability, also known as ‘noise’. Single-cell RNA sequencing (scRNA-seq) technology has been used to study miRNA and mRNA expression in single cells.
Wendao Liu, Noam Shomron
openaire +2 more sources
Quantitative analysis of cell-type specific gene expression in the green alga Volvox carteri
Nematollahi G, Kianianmomeni A, Hallmann A. Quantitative analysis of cell-type specific gene expression in the green alga Volvox carteri. BMC Genomics. 2006;7(1): 321.Background: The multicellular alga Volvox carteri possesses only two cell types: mortal,
Kianianmomeni Arash +5 more
core +1 more source
Unraveling the Regulatory Mechanisms Underlying Tissue-Dependent Genetic Variation of Gene Expression [PDF]
It is known that genetic variants can affect gene expression, but it is not yet completely clear through what mechanisms genetic variation mediate this expression.
Harry J M Groen +145 more
core +1 more source
Edge-weighting of gene expression graphs [PDF]
In recent years, considerable research efforts have been directed to micro-array technologies and their role in providing simultaneous information on expression profiles for thousands of genes.
Kerr, Gráinne +8 more
core +1 more source
Dynamic expression of chromatin modifiers during developmental transitions in mouse preimplantation embryos [PDF]
During mouse preimplantation development, major changes in cell fate are accompanied by extensive alterations of gene expression programs. Embryos first transition from a maternal to zygotic program and subsequently specify the pluripotent and the ...
Peters, Antoine H. F. M. +3 more
core +1 more source

